RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 SLC3A2P08195 630 aaKnown RBP12.44□□□□□ -0.42
COL4A1-205ENST00000615732 COPB2P35606 906 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 ANTXR2P58335 489 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 CCT2P78371 535 aaKnown RBP12.44□□□□□ -0.42
COL4A1-205ENST00000615732 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
COL4A1-205ENST00000615732 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 RNF180Q86T96 592 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
COL4A1-205ENST00000615732 HOMER2Q9NSB8 354 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 CTDP1Q9Y5B0 961 aaPredicted RBP12.44□□□□□ -0.42
COL4A1-205ENST00000615732 TACC3Q9Y6A5 838 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 ERICH2A1L162 156 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 KIAA0355O15063 1070 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 ADCY6O43306 1168 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 JAK2O60674 1132 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 ADAMTS4O75173 837 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 PDIA3P30101 505 aaKnown RBP12.43□□□□□ -0.42
COL4A1-205ENST00000615732 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 SYNE3Q6ZMZ3 975 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 CYB5R4Q7L1T6 521 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 MTMR4Q9NYA4 1195 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 ANAPC4Q9UJX5 808 aa12.43□□□□□ -0.42
COL4A1-205ENST00000615732 DIS3Q9Y2L1 958 aaKnown RBP12.43□□□□□ -0.42
COL4A1-205ENST00000615732 DNAJC25-GNG10A0A024R161 153 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 TMEM265A0A087WTH1 108 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 PTPDC1A2A3K4 754 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 CCDC69A6NI79 296 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 H3BQV1 296 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 CPLX1O14810 134 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 IFIT3O14879 490 aaKnown RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 ZBED4O75132 1171 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 KDM4AO75164 1064 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 SNAI1O95863 264 aaPredicted RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 RAG1P15918 1043 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 EVCP57679 992 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 FPGSQ05932 587 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 FAAP100Q0VG06 881 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 GSE1Q14687 1217 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 NSUN7Q8NE18 718 aaKnown RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 ESR2Q92731 530 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 FGD4Q96M96 766 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 SLC38A10Q9HBR0 1119 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 DDX49Q9Y6V7 483 aaKnown RBP12.42□□□□□ -0.42
COL4A1-205ENST00000615732 PLIN4Q96Q06 1357 aa12.42□□□□□ -0.42
COL4A1-205ENST00000615732 SYNGAP1Q96PV0 1343 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 CDKL5O76039 1030 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 TTLL1O95922 423 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 TSPY3P0CV98 308 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 TSPY8P0CW00 308 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 DNAJB2P25686 324 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 METAP2P50579 478 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL4A1-205ENST00000615732 ACLYP53396 1101 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 SNAP25P60880 206 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
COL4A1-205ENST00000615732 GRIN2CQ14957 1233 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 WTAPQ15007 396 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 FOXD4L6Q3SYB3 417 aaPredicted RBP12.41□□□□□ -0.42
COL4A1-205ENST00000615732 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 FOXD4L3Q6VB84 417 aaPredicted RBP12.41□□□□□ -0.42
COL4A1-205ENST00000615732 ANKRD33Q7Z3H0 272 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 ANKRD35Q8N283 1001 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 USP38Q8NB14 1042 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 SMARCC2Q8TAQ2 1214 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 MTA3Q9BTC8 594 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 NCOA5Q9HCD5 579 aaKnown RBP12.41□□□□□ -0.42
COL4A1-205ENST00000615732 STARD7Q9NQZ5 370 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 TMEM39AQ9NV64 488 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.41□□□□□ -0.42
COL4A1-205ENST00000615732 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
COL4A1-205ENST00000615732 GOLGA8AA7E2F4 631 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 TMEM232C9JQI7 657 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 ZBTB43O43298 467 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 DTNBO60941 627 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 PRPF40AO75400 957 aaKnown RBP12.4□□□□□ -0.42
COL4A1-205ENST00000615732 C6orf222P0C671 652 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-205ENST00000615732 PTGS1P23219 599 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 TFAP4Q01664 338 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 KCNA10Q16322 511 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 CCSAPQ6IQ19 270 aaPredicted RBP12.4□□□□□ -0.42
COL4A1-205ENST00000615732 ARMCX2Q7L311 632 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 GMCL1P1Q8NEA9 526 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 TSEN34Q9BSV6 310 aaKnown RBP12.4□□□□□ -0.42
COL4A1-205ENST00000615732 ZNF287Q9HBT7 754 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 FEM1BQ9UK73 627 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 FAM184BQ9ULE4 1060 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 SLC12A7Q9Y666 1083 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms