RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 BTBD18B2RXH4 712 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 H3BQV1 296 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 M0R2N6 131 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 VWA5AO00534 786 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 CNMDO75829 334 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 INHAP05111 366 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 MAPK4P31152 587 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 NAPAP54920 295 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 ERVK-9P63128 1117 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 ERVK-24P63145 666 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 USH1GQ495M9 461 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 LBX2Q6XYB7 198 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
PCDH9-205ENST00000614931 PRPF38AQ8NAV1 312 aaKnown RBP9.24□□□□□ -0.93
PCDH9-205ENST00000614931 AGBL1Q96MI9 1066 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 RNF208Q9H0X6 261 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 UNC93B1Q9H1C4 597 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 RAVER2Q9HCJ3 691 aaKnown RBP9.24□□□□□ -0.93
PCDH9-205ENST00000614931 SH3GLB2Q9NR46 395 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 RABGAP1Q9Y3P9 1069 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 LRRC37A2A6NM11 1700 aa9.24□□□□□ -0.93
PCDH9-205ENST00000614931 MCM3APO60318 1980 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 KIAA0100Q14667 2235 aaKnown RBP9.23□□□□□ -0.93
PCDH9-205ENST00000614931 ESYT2A0FGR8 921 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 hCG_1984214I3L0E3 225 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 WNT7AO00755 349 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 XRCC5P13010 732 aaKnown RBP9.23□□□□□ -0.93
PCDH9-205ENST00000614931 NLRP5P59047 1200 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 TRIM29Q14134 588 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 COG2Q14746 738 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 TMEM132BQ14DG7 1078 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 UBE2SQ16763 222 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 FOXD4L6Q3SYB3 417 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-205ENST00000614931 MUM1L1Q5H9M0 696 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 MCTP1Q6DN14 999 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 PPP1R18Q6NYC8 613 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 FOXD4L3Q6VB84 417 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-205ENST00000614931 UBE2Q1Q7Z7E8 422 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 CPXCR1Q8N123 301 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 ZNF713Q8N859 430 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-205ENST00000614931 DAGLBQ8NCG7 672 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 RGS22Q8NE09 1264 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 USP6NLQ92738 828 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 AMNQ9BXJ7 453 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 ZMYND12Q9H0C1 365 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 PORCNQ9H237 461 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 PAK6Q9NQU5 681 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-205ENST00000614931 TMEM260Q9NX78 707 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 BTBD7Q9P203 1132 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 ZNF214Q9UL59 606 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-205ENST00000614931 RIPK3Q9Y572 518 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 PCDHA1Q9Y5I3 950 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 KIAA1217Q5T5P2 1943 aa9.23□□□□□ -0.93
PCDH9-205ENST00000614931 SMCO2A6NFE2 343 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 NFIBO00712 420 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 SGPL1O95470 568 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 HMGCRP04035 888 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 ICAM1P05362 532 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 CAPN2P17655 700 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 U2AF2P26368 475 aaKnown RBP eCLIP9.22□□□□□ -0.93
PCDH9-205ENST00000614931 KRT2P35908 639 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 CLK2P49760 499 aaKnown RBP9.22□□□□□ -0.93
PCDH9-205ENST00000614931 CCNA1P78396 465 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 MORN1Q5T089 497 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 GPR142Q7Z601 462 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 BLIDQ8IZY5 108 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 CCDC148Q8NFR7 591 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 U2AF1L4Q8WU68 220 aaKnown RBP9.22□□□□□ -0.93
PCDH9-205ENST00000614931 SOCS4Q8WXH5 440 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 CLEC4DQ8WXI8 215 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 TRIB2Q92519 343 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 TBC1D5Q92609 795 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 PGBD1Q96JS3 809 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 NUDT12Q9BQG2 462 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 PAGR1Q9BTK6 254 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 FTOQ9C0B1 505 aaKnown RBP eCLIP9.22□□□□□ -0.93
PCDH9-205ENST00000614931 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 HOXC10Q9NYD6 342 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 CCPG1Q9ULG6 757 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 PCDHA6Q9UN73 950 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 PCDHA4Q9UN74 947 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 PCDHA8Q9Y5H6 950 aa9.22□□□□□ -0.93
PCDH9-205ENST00000614931 MEIS2O14770 477 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 EDIL3O43854 480 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 ZBED4O75132 1171 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 BAG4O95429 457 aaKnown RBP9.21□□□□□ -0.94
PCDH9-205ENST00000614931 ALAS1P13196 640 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 XBP1P17861 261 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 CYP2B6P20813 491 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 TOB1P50616 345 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-205ENST00000614931 ADCY7P51828 1080 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 NBR1Q14596 966 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 MAP3K21Q5TCX8 1036 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 MYSM1Q5VVJ2 828 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 NOSTRINQ8IVI9 506 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.94
PCDH9-205ENST00000614931 TRMT44Q8IYL2 757 aaKnown RBP9.21□□□□□ -0.94
PCDH9-205ENST00000614931 FAM177A1Q8N128 213 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-205ENST00000614931 FOXP1Q9H334 677 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms