RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 LCTP09848 1927 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 B4E1Z4 1266 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 TIMP1P01033 207 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 ALDH5A1P51649 535 aaPredicted RBP25.43■■□□□ 1.66
CBWD1-223ENST00000613988 EPHB4P54760 987 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 CXCL17Q6UXB2 119 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 RNF207Q6ZRF8 634 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 PNMA1Q8ND90 353 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 FAM161BQ96MY7 647 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 ZSCAN10Q96SZ4 725 aaPredicted RBP25.43■■□□□ 1.66
CBWD1-223ENST00000613988 KAT14Q9H8E8 782 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 TBX21Q9UL17 535 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 Q9Y3F1 56 aa25.43■■□□□ 1.66
CBWD1-223ENST00000613988 LOC102724159A0A0B4J2E5 919 aa25.42■■□□□ 1.66
CBWD1-223ENST00000613988 TLR3O15455 904 aaKnown RBP25.42■■□□□ 1.66
CBWD1-223ENST00000613988 ZEB2O60315 1214 aa25.42■■□□□ 1.66
CBWD1-223ENST00000613988 PTGS1P23219 599 aa25.42■■□□□ 1.66
CBWD1-223ENST00000613988 PWP2Q15269 919 aaKnown RBP25.42■■□□□ 1.66
CBWD1-223ENST00000613988 ZNF697Q5TEC3 545 aa25.42■■□□□ 1.66
CBWD1-223ENST00000613988 RNPC3Q96LT9 517 aaKnown RBP25.42■■□□□ 1.66
CBWD1-223ENST00000613988 UBA5Q9GZZ9 404 aa25.42■■□□□ 1.66
CBWD1-223ENST00000613988 UPF2Q9HAU5 1272 aaKnown RBP25.42■■□□□ 1.66
CBWD1-223ENST00000613988 ZSWIM5Q9P217 1185 aa25.42■■□□□ 1.66
CBWD1-223ENST00000613988 LRRC37A2A6NM11 1700 aa25.41■■□□□ 1.66
CBWD1-223ENST00000613988 WDR19Q8NEZ3 1342 aa25.41■■□□□ 1.66
CBWD1-223ENST00000613988 CABYRO75952 493 aa25.41■■□□□ 1.66
CBWD1-223ENST00000613988 TMEM63BQ5T3F8 832 aa25.41■■□□□ 1.66
CBWD1-223ENST00000613988 SLC30A10Q6XR72 485 aa25.41■■□□□ 1.66
CBWD1-223ENST00000613988 ANKS1AQ92625 1134 aa25.41■■□□□ 1.66
CBWD1-223ENST00000613988 CPVLQ9H3G5 476 aa25.41■■□□□ 1.66
CBWD1-223ENST00000613988 RPS6P62753 249 aaKnown RBP25.4■■□□□ 1.66
CBWD1-223ENST00000613988 SMAD3P84022 425 aaKnown RBP25.4■■□□□ 1.66
CBWD1-223ENST00000613988 MFSD5Q6N075 450 aa25.4■■□□□ 1.66
CBWD1-223ENST00000613988 FAM126BQ8IXS8 530 aa25.4■■□□□ 1.66
CBWD1-223ENST00000613988 MPHOSPH6Q99547 160 aaKnown RBP25.4■■□□□ 1.66
CBWD1-223ENST00000613988 KRT23Q9C075 422 aa25.4■■□□□ 1.66
CBWD1-223ENST00000613988 USH1GQ495M9 461 aa25.39■■□□□ 1.65
CBWD1-223ENST00000613988 DUSP28Q4G0W2 176 aa25.39■■□□□ 1.65
CBWD1-223ENST00000613988 ENAHQ8N8S7 591 aaPredicted RBP25.39■■□□□ 1.65
CBWD1-223ENST00000613988 WDR11Q9BZH6 1224 aa25.39■■□□□ 1.65
CBWD1-223ENST00000613988 CNNM2Q9H8M5 875 aa25.39■■□□□ 1.65
CBWD1-223ENST00000613988 ITGA7Q13683 1181 aa25.38■■□□□ 1.65
CBWD1-223ENST00000613988 GUCD1Q96NT3 240 aa25.38■■□□□ 1.65
CBWD1-223ENST00000613988 TNKSO95271 1327 aa25.38■■□□□ 1.65
CBWD1-223ENST00000613988 PDE4DQ08499 809 aa25.37■■□□□ 1.65
CBWD1-223ENST00000613988 ASPRV1Q53RT3 343 aa25.37■■□□□ 1.65
CBWD1-223ENST00000613988 SLC43A3Q8NBI5 491 aa25.37■■□□□ 1.65
CBWD1-223ENST00000613988 UBAC1Q9BSL1 405 aa25.37■■□□□ 1.65
CBWD1-223ENST00000613988 IL25Q9H293 177 aa25.37■■□□□ 1.65
CBWD1-223ENST00000613988 RBM47A0AV96 593 aaKnown RBP25.36■■□□□ 1.65
CBWD1-223ENST00000613988 SEC24BO95487 1268 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 CD4P01730 458 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 CDC37Q16543 378 aaPredicted RBP25.36■■□□□ 1.65
CBWD1-223ENST00000613988 ADGRF4Q8IZF3 695 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 TMEM199Q8N511 208 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 RGS22Q8NE09 1264 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 DNERQ8NFT8 737 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 SEZ6LQ9BYH1 1024 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 PPP1R12CQ9BZL4 782 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 A0A0C4DFX4 3053 aa25.36■■□□□ 1.65
CBWD1-223ENST00000613988 B4DLN1 442 aa25.35■■□□□ 1.65
CBWD1-223ENST00000613988 PARP1P09874 1014 aaKnown RBP25.35■■□□□ 1.65
CBWD1-223ENST00000613988 MRPL12P52815 198 aaKnown RBP25.35■■□□□ 1.65
CBWD1-223ENST00000613988 PPIGQ13427 754 aaKnown RBP eCLIP25.35■■□□□ 1.65
CBWD1-223ENST00000613988 SEMA6BQ9H3T3 888 aa25.35■■□□□ 1.65
CBWD1-223ENST00000613988 GRIN2DO15399 1336 aa25.35■■□□□ 1.65
CBWD1-223ENST00000613988 DHX16O60231 1041 aaKnown RBP25.34■■□□□ 1.65
CBWD1-223ENST00000613988 PSMC6P62333 389 aa25.34■■□□□ 1.65
CBWD1-223ENST00000613988 RUFY2Q8WXA3 655 aa25.34■■□□□ 1.65
CBWD1-223ENST00000613988 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.34■■□□□ 1.65
CBWD1-223ENST00000613988 VAT1LQ9HCJ6 419 aa25.34■■□□□ 1.65
CBWD1-223ENST00000613988 ABCB11O95342 1321 aa25.34■■□□□ 1.65
CBWD1-223ENST00000613988 CSF2RAP15509 400 aa25.33■■□□□ 1.65
CBWD1-223ENST00000613988 EDNRBP24530 442 aa25.33■■□□□ 1.65
CBWD1-223ENST00000613988 IFIT1BQ5T764 474 aaKnown RBP25.33■■□□□ 1.65
CBWD1-223ENST00000613988 OR6J1Q8NGC5 347 aa25.33■■□□□ 1.65
CBWD1-223ENST00000613988 POLR3EQ9NVU0 708 aa25.33■■□□□ 1.65
CBWD1-223ENST00000613988 CYP2C18P33260 490 aa25.32■■□□□ 1.64
CBWD1-223ENST00000613988 CPT1AP50416 773 aa25.32■■□□□ 1.64
CBWD1-223ENST00000613988 C16orf59Q7L2K0 433 aa25.32■■□□□ 1.64
CBWD1-223ENST00000613988 MAF1Q9H063 256 aa25.32■■□□□ 1.64
CBWD1-223ENST00000613988 RAD50Q92878 1312 aa25.32■■□□□ 1.64
CBWD1-223ENST00000613988 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.31■■□□□ 1.64
CBWD1-223ENST00000613988 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.31■■□□□ 1.64
CBWD1-223ENST00000613988 CHMLP26374 656 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 TRDNQ13061 729 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 PPP2R5BQ15173 497 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 QRICH1Q2TAL8 776 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 SCFD2Q8WU76 684 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 TBC1D5Q92609 795 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 CDX2Q99626 313 aaPredicted RBP25.31■■□□□ 1.64
CBWD1-223ENST00000613988 TRPV6Q9H1D0 765 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 HIPK3Q9H422 1215 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 GPHNQ9NQX3 736 aaPredicted RBP25.31■■□□□ 1.64
CBWD1-223ENST00000613988 NKRFO15226 690 aaKnown RBP eCLIP25.31■■□□□ 1.64
CBWD1-223ENST00000613988 MYL3P08590 195 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 BRDTQ58F21 947 aaPredicted RBP25.31■■□□□ 1.64
CBWD1-223ENST00000613988 TMEM240Q5SV17 173 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 FBXO11Q86XK2 927 aa25.31■■□□□ 1.64
CBWD1-223ENST00000613988 MCF2L2Q86YR7 1114 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms