RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 C16orf86Q6ZW13 317 aa12.64□□□□□ -0.39
SRSF3-204ENST00000613941 RNF135Q8IUD6 432 aa12.64□□□□□ -0.39
SRSF3-204ENST00000613941 CHST13Q8NET6 341 aa12.64□□□□□ -0.39
SRSF3-204ENST00000613941 PBXIP1Q96AQ6 731 aa12.64□□□□□ -0.39
SRSF3-204ENST00000613941 EAF2Q96CJ1 260 aaPredicted RBP12.64□□□□□ -0.39
SRSF3-204ENST00000613941 PABPC5Q96DU9 382 aaKnown RBP12.64□□□□□ -0.39
SRSF3-204ENST00000613941 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
SRSF3-204ENST00000613941 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
SRSF3-204ENST00000613941 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
SRSF3-204ENST00000613941 CLDND1Q9NY35 253 aa12.64□□□□□ -0.39
SRSF3-204ENST00000613941 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
SRSF3-204ENST00000613941 TMEM221A6NGB7 291 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 ASB14A6NK59 587 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 M0R296 226 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 SURF6O75683 361 aaKnown RBP12.63□□□□□ -0.39
SRSF3-204ENST00000613941 CHMP4BP1P59074 171 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 STK11IPQ8N1F8 1099 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 MRPL38Q96DV4 380 aaKnown RBP12.63□□□□□ -0.39
SRSF3-204ENST00000613941 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
SRSF3-204ENST00000613941 RAD9AQ99638 391 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 ACAD9Q9H845 621 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 ALG13Q9NP73 1137 aaKnown RBP12.63□□□□□ -0.39
SRSF3-204ENST00000613941 POLR3EQ9NVU0 708 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 FAM50BQ9Y247 325 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
SRSF3-204ENST00000613941 TCRBV5S4A2TA0A5A2 114 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 F5H6K3 240 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 RGS20O76081 388 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 KLRC3Q07444 240 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 BFSP2Q13515 415 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 TIGD5Q53EQ6 642 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 C12orf60Q5U649 245 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 IQSEC1Q6DN90 963 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
SRSF3-204ENST00000613941 BANK1Q8NDB2 785 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 EDAQ92838 391 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 MTG1Q9BT17 334 aaPredicted RBP12.62□□□□□ -0.39
SRSF3-204ENST00000613941 RNF146Q9NTX7 359 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 Q9Y3F1 56 aa12.62□□□□□ -0.39
SRSF3-204ENST00000613941 USP17L12C9JPN9 530 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 USP17L21D6R901 530 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 BCAR3O75815 825 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 MBD4O95243 580 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 VCPP55072 806 aaKnown RBP12.61□□□□□ -0.39
SRSF3-204ENST00000613941 POLA2Q14181 598 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 CNKSR3Q6P9H4 555 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 RPAINQ86UA6 219 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 OR6J1Q8NGC5 347 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
SRSF3-204ENST00000613941 CHMP4CQ96CF2 233 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
SRSF3-204ENST00000613941 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
SRSF3-204ENST00000613941 MBTPS2O43462 519 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 NBNO60934 754 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 LTBRP36941 435 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 CPT1AP50416 773 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 DLX2Q07687 328 aaPredicted RBP12.6□□□□□ -0.39
SRSF3-204ENST00000613941 PTPROQ16827 1216 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 LRRC8DQ7L1W4 858 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 ASCL5Q7RTU5 278 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 BMP8AQ7Z5Y6 402 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 CTAGE1Q96RT6 745 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 PRRX2Q99811 253 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
SRSF3-204ENST00000613941 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
SRSF3-204ENST00000613941 CSPG5O95196 566 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 CHGBP05060 677 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 ALAS1P13196 640 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 OAZ1P54368 228 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 SNAP25P60880 206 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 GPM6BQ13491 265 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 SMAD2Q15796 467 aaKnown RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 PTGISQ16647 500 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 LRRFIP1Q32MZ4 808 aaKnown RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 EPC2Q52LR7 807 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 NFRKBQ6P4R8 1299 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.59□□□□□ -0.391e-18■■■■□ 24.2
SRSF3-204ENST00000613941 AMOTL1Q8IY63 956 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 FBXL6Q8N531 539 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 AFAP1L1Q8TED9 768 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 DHX38Q92620 1227 aaKnown RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 DNAJC2Q99543 621 aaKnown RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 POP1Q99575 1024 aaKnown RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 WDR11Q9BZH6 1224 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 NSUN3Q9H649 340 aaKnown RBP12.59□□□□□ -0.39
SRSF3-204ENST00000613941 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 CTNNA3Q9UI47 895 aa12.59□□□□□ -0.39
SRSF3-204ENST00000613941 MYH6P13533 1939 aa12.58□□□□□ -0.39
SRSF3-204ENST00000613941 H0Y858 1186 aa12.58□□□□□ -0.4
SRSF3-204ENST00000613941 STXBP3O00186 592 aa12.58□□□□□ -0.4
SRSF3-204ENST00000613941 GOLIM4O00461 696 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms