RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 PTH1RQ03431 593 aa26.55■■□□□ 1.84
FAM228B-208ENST00000613899 ADGRF4Q8IZF3 695 aa26.55■■□□□ 1.84
FAM228B-208ENST00000613899 DNERQ8NFT8 737 aa26.55■■□□□ 1.84
FAM228B-208ENST00000613899 VTI1AQ96AJ9 217 aa26.55■■□□□ 1.84
FAM228B-208ENST00000613899 PDGFCQ9NRA1 345 aa26.55■■□□□ 1.84
FAM228B-208ENST00000613899 TMEM39AQ9NV64 488 aa26.55■■□□□ 1.84
FAM228B-208ENST00000613899 DHX16O60231 1041 aaKnown RBP26.54■■□□□ 1.84
FAM228B-208ENST00000613899 RAG1P15918 1043 aa26.54■■□□□ 1.84
FAM228B-208ENST00000613899 SEC23AQ15436 765 aa26.54■■□□□ 1.84
FAM228B-208ENST00000613899 FSCN1Q16658 493 aaKnown RBP26.54■■□□□ 1.84
FAM228B-208ENST00000613899 KIAA1211Q6ZU35 1233 aa26.54■■□□□ 1.84
FAM228B-208ENST00000613899 RGS22Q8NE09 1264 aa26.54■■□□□ 1.84
FAM228B-208ENST00000613899 ABCB11O95342 1321 aa26.54■■□□□ 1.84
FAM228B-208ENST00000613899 B4DLN1 442 aa26.53■■□□□ 1.84
FAM228B-208ENST00000613899 ZEB2O60315 1214 aa26.53■■□□□ 1.84
FAM228B-208ENST00000613899 CABYRO75952 493 aa26.53■■□□□ 1.84
FAM228B-208ENST00000613899 MRPL12P52815 198 aaKnown RBP26.53■■□□□ 1.84
FAM228B-208ENST00000613899 BEX3Q00994 111 aa26.53■■□□□ 1.84
FAM228B-208ENST00000613899 FAAP100Q0VG06 881 aa26.53■■□□□ 1.84
FAM228B-208ENST00000613899 CYB5R4Q7L1T6 521 aa26.53■■□□□ 1.84
FAM228B-208ENST00000613899 RALYLQ86SE5 291 aaKnown RBP26.53■■□□□ 1.84
FAM228B-208ENST00000613899 ARVCFO00192 962 aa26.52■■□□□ 1.84
FAM228B-208ENST00000613899 PDE4DQ08499 809 aa26.52■■□□□ 1.84
FAM228B-208ENST00000613899 ERICH2A1L162 156 aa26.51■■□□□ 1.83
FAM228B-208ENST00000613899 DYNC1LI2O43237 492 aaPredicted RBP26.51■■□□□ 1.83
FAM228B-208ENST00000613899 EDNRBP24530 442 aa26.51■■□□□ 1.83
FAM228B-208ENST00000613899 CDK7P50613 346 aa26.51■■□□□ 1.83
FAM228B-208ENST00000613899 QRICH1Q2TAL8 776 aa26.51■■□□□ 1.83
FAM228B-208ENST00000613899 DUSP28Q4G0W2 176 aa26.51■■□□□ 1.83
FAM228B-208ENST00000613899 NCOA7Q8NI08 942 aa26.51■■□□□ 1.83
FAM228B-208ENST00000613899 TLR3O15455 904 aaKnown RBP26.5■■□□□ 1.83
FAM228B-208ENST00000613899 ITGB8P26012 769 aa26.5■■□□□ 1.83
FAM228B-208ENST00000613899 SART3Q15020 963 aaKnown RBP26.5■■□□□ 1.83
FAM228B-208ENST00000613899 FBXO11Q86XK2 927 aa26.5■■□□□ 1.83
FAM228B-208ENST00000613899 MCF2L2Q86YR7 1114 aa26.5■■□□□ 1.83
FAM228B-208ENST00000613899 WDR11Q9BZH6 1224 aa26.5■■□□□ 1.83
FAM228B-208ENST00000613899 RBM47A0AV96 593 aaKnown RBP26.49■■□□□ 1.83
FAM228B-208ENST00000613899 CXCL17Q6UXB2 119 aa26.49■■□□□ 1.83
FAM228B-208ENST00000613899 DEFB123Q8N688 67 aa26.49■■□□□ 1.83
FAM228B-208ENST00000613899 MAP4K1Q92918 833 aa26.49■■□□□ 1.83
FAM228B-208ENST00000613899 SEZ6LQ9BYH1 1024 aa26.49■■□□□ 1.83
FAM228B-208ENST00000613899 JMJD4Q9H9V9 463 aa26.49■■□□□ 1.83
FAM228B-208ENST00000613899 TBX21Q9UL17 535 aa26.49■■□□□ 1.83
FAM228B-208ENST00000613899 MRPL11Q9Y3B7 192 aaKnown RBP26.49■■□□□ 1.83
FAM228B-208ENST00000613899 E7EWF7 191 aa26.48■■□□□ 1.83
FAM228B-208ENST00000613899 IFIT3O14879 490 aaKnown RBP26.48■■□□□ 1.83
FAM228B-208ENST00000613899 FPGSQ05932 587 aa26.48■■□□□ 1.83
FAM228B-208ENST00000613899 SHHQ15465 462 aa26.48■■□□□ 1.83
FAM228B-208ENST00000613899 FAM126BQ8IXS8 530 aa26.48■■□□□ 1.83
FAM228B-208ENST00000613899 STAG2Q8N3U4 1231 aa26.48■■□□□ 1.83
FAM228B-208ENST00000613899 VAT1LQ9HCJ6 419 aa26.48■■□□□ 1.83
FAM228B-208ENST00000613899 KLRF2D3W0D1 207 aa26.47■■□□□ 1.83
FAM228B-208ENST00000613899 NKRFO15226 690 aaKnown RBP eCLIP26.47■■□□□ 1.83
FAM228B-208ENST00000613899 PTGS1P23219 599 aa26.47■■□□□ 1.83
FAM228B-208ENST00000613899 PPP2R5BQ15173 497 aa26.47■■□□□ 1.83
FAM228B-208ENST00000613899 C9orf50Q5SZB4 431 aa26.47■■□□□ 1.83
FAM228B-208ENST00000613899 SCFD2Q8WU76 684 aa26.47■■□□□ 1.83
FAM228B-208ENST00000613899 AMNQ9BXJ7 453 aa26.47■■□□□ 1.83
FAM228B-208ENST00000613899 MAD2L2Q9UI95 211 aa26.47■■□□□ 1.83
FAM228B-208ENST00000613899 RBM8AQ9Y5S9 174 aaKnown RBP26.47■■□□□ 1.83
FAM228B-208ENST00000613899 TIMP1P01033 207 aa26.46■■□□□ 1.83
FAM228B-208ENST00000613899 CPT1AP50416 773 aa26.46■■□□□ 1.83
FAM228B-208ENST00000613899 WTAPQ15007 396 aa26.46■■□□□ 1.83
FAM228B-208ENST00000613899 TMEM63BQ5T3F8 832 aa26.46■■□□□ 1.83
FAM228B-208ENST00000613899 SLC43A3Q8NBI5 491 aa26.46■■□□□ 1.83
FAM228B-208ENST00000613899 PALM3A6NDB9 673 aaPredicted RBP26.45■■□□□ 1.82
FAM228B-208ENST00000613899 ITGA7Q13683 1181 aa26.45■■□□□ 1.82
FAM228B-208ENST00000613899 GRM4Q14833 912 aa26.45■■□□□ 1.82
FAM228B-208ENST00000613899 STOX1Q6ZVD7 989 aa26.45■■□□□ 1.82
FAM228B-208ENST00000613899 Q7L0L9 218 aa26.45■■□□□ 1.82
FAM228B-208ENST00000613899 OR6J1Q8NGC5 347 aa26.45■■□□□ 1.82
FAM228B-208ENST00000613899 SYTL5Q8TDW5 730 aaPredicted RBP26.45■■□□□ 1.82
FAM228B-208ENST00000613899 NSUN6Q8TEA1 469 aaKnown RBP26.45■■□□□ 1.82
FAM228B-208ENST00000613899 POLR3EQ9NVU0 708 aa26.45■■□□□ 1.82
FAM228B-208ENST00000613899 TAF6LQ9Y6J9 622 aa26.45■■□□□ 1.82
FAM228B-208ENST00000613899 ZBTB5O15062 677 aa26.44■■□□□ 1.82
FAM228B-208ENST00000613899 BRDTQ58F21 947 aaPredicted RBP26.44■■□□□ 1.82
FAM228B-208ENST00000613899 CENPQQ7L2Z9 268 aaPredicted RBP26.44■■□□□ 1.82
FAM228B-208ENST00000613899 MTMR8Q96EF0 704 aa26.44■■□□□ 1.82
FAM228B-208ENST00000613899 CD4P01730 458 aa26.43■■□□□ 1.82
FAM228B-208ENST00000613899 TRAF1Q13077 416 aa26.43■■□□□ 1.82
FAM228B-208ENST00000613899 TTLL4Q14679 1199 aa26.43■■□□□ 1.82
FAM228B-208ENST00000613899 TMEM67Q5HYA8 995 aa26.43■■□□□ 1.82
FAM228B-208ENST00000613899 FAM109BQ6ICB4 259 aaPredicted RBP26.43■■□□□ 1.82
FAM228B-208ENST00000613899 MFSD5Q6N075 450 aa26.43■■□□□ 1.82
FAM228B-208ENST00000613899 TBC1D5Q92609 795 aa26.43■■□□□ 1.82
FAM228B-208ENST00000613899 RNPC3Q96LT9 517 aaKnown RBP26.43■■□□□ 1.82
FAM228B-208ENST00000613899 KIAA1217Q5T5P2 1943 aa26.42■■□□□ 1.82
FAM228B-208ENST00000613899 CATIPQ7Z7H3 387 aa26.42■■□□□ 1.82
FAM228B-208ENST00000613899 MB21D2Q8IYB1 491 aaPredicted RBP26.42■■□□□ 1.82
FAM228B-208ENST00000613899 IWS1Q96ST2 819 aa26.42■■□□□ 1.82
FAM228B-208ENST00000613899 RMDN3Q96TC7 470 aa26.42■■□□□ 1.82
FAM228B-208ENST00000613899 COL20A1Q9P218 1284 aa26.42■■□□□ 1.82
FAM228B-208ENST00000613899 LAMA2P24043 3122 aaKnown RBP26.41■■□□□ 1.82
FAM228B-208ENST00000613899 TXNP10599 105 aaKnown RBP26.41■■□□□ 1.82
FAM228B-208ENST00000613899 EPHB4P54760 987 aa26.41■■□□□ 1.82
FAM228B-208ENST00000613899 TROAPQ12815 778 aa26.41■■□□□ 1.82
FAM228B-208ENST00000613899 PPIGQ13427 754 aaKnown RBP eCLIP26.41■■□□□ 1.82
FAM228B-208ENST00000613899 CHST3Q7LGC8 479 aa26.41■■□□□ 1.82
FAM228B-208ENST00000613899 TAAR1Q96RJ0 339 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms