RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KIF22Q14807 665 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
CD48-203ENST00000613788 PLEKHH3Q7Z736 793 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 ABRAQ8N0Z2 381 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 TBC1D5Q92609 795 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 MMP19Q99542 508 aa16.86■□□□□ 0.29
CD48-203ENST00000613788 GPR25O00155 361 aa16.85■□□□□ 0.29
CD48-203ENST00000613788 MEIS2O14770 477 aa16.85■□□□□ 0.29
CD48-203ENST00000613788 FOSP01100 380 aaPredicted RBP16.85■□□□□ 0.29
CD48-203ENST00000613788 HSD17B4P51659 736 aa16.85■□□□□ 0.29
CD48-203ENST00000613788 RPS6P62753 249 aaKnown RBP16.85■□□□□ 0.29
CD48-203ENST00000613788 BAATQ14032 418 aaPredicted RBP16.85■□□□□ 0.29
CD48-203ENST00000613788 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
CD48-203ENST00000613788 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
CD48-203ENST00000613788 GPR142Q7Z601 462 aa16.85■□□□□ 0.29
CD48-203ENST00000613788 DIS3L2Q8IYB7 885 aaKnown RBP16.85■□□□□ 0.29
CD48-203ENST00000613788 REXO1Q8N1G1 1221 aaKnown RBP16.85■□□□□ 0.29
CD48-203ENST00000613788 A1CFQ9NQ94 594 aaKnown RBP16.85■□□□□ 0.29
CD48-203ENST00000613788 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
CD48-203ENST00000613788 BTBD18B2RXH4 712 aa16.84■□□□□ 0.29
CD48-203ENST00000613788 PTPREP23469 700 aa16.84■□□□□ 0.29
CD48-203ENST00000613788 FCGRTP55899 365 aa16.84■□□□□ 0.29
CD48-203ENST00000613788 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
CD48-203ENST00000613788 NPY5RQ15761 445 aa16.84■□□□□ 0.29
CD48-203ENST00000613788 FOXP1Q9H334 677 aaPredicted RBP16.84■□□□□ 0.29
CD48-203ENST00000613788 BIN2Q9UBW5 565 aaPredicted RBP16.84■□□□□ 0.29
CD48-203ENST00000613788 SPDYE3A6NKU9 549 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 TNPO2O14787 897 aaKnown RBP16.83■□□□□ 0.28
CD48-203ENST00000613788 HOXA13P31271 388 aaPredicted RBP16.83■□□□□ 0.28
CD48-203ENST00000613788 CLK2P49760 499 aaKnown RBP16.83■□□□□ 0.28
CD48-203ENST00000613788 NUCB2P80303 420 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 AP3B2Q13367 1082 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 UBE2SQ16763 222 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 JMYQ8N9B5 988 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 CIZ1Q9ULV3 898 aaPredicted RBP16.83■□□□□ 0.28
CD48-203ENST00000613788 PCDHA6Q9UN73 950 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 MTMR6Q9Y217 621 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 PCDHA8Q9Y5H6 950 aa16.83■□□□□ 0.28
CD48-203ENST00000613788 SLC15A5A6NIM6 579 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 FKTNO75072 461 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.28
CD48-203ENST00000613788 DDIT3P35638 169 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 PSMC4P43686 418 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 ARHGEF6Q15052 776 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 JAKMIP3Q5VZ66 844 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 KRT25Q7Z3Z0 450 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 OXER1Q8TDS5 423 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 SYTL5Q8TDW5 730 aaPredicted RBP16.82■□□□□ 0.28
CD48-203ENST00000613788 EHMT1Q9H9B1 1298 aa16.82■□□□□ 0.28
CD48-203ENST00000613788 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 M0R2N6 131 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 NR5A1Q13285 461 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 GRB14Q14449 540 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 ERO1AQ96HE7 468 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
CD48-203ENST00000613788 SLC5A4Q9NY91 659 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
CD48-203ENST00000613788 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
CD48-203ENST00000613788 ZSCAN22P10073 491 aaPredicted RBP16.8■□□□□ 0.28
CD48-203ENST00000613788 ADORA2AP29274 412 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 DPP9Q86TI2 863 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 NOSTRINQ8IVI9 506 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 DNERQ8NFT8 737 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 RASGRP4Q8TDF6 673 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 TMEM260Q9NX78 707 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 DNAJC25-GNG10A0A024R161 153 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 B4DLN1 442 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 ADAMTS3O15072 1205 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
CD48-203ENST00000613788 BRD1O95696 1058 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 GNRH1P01148 92 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 HOXD10P28358 340 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 NONOQ15233 471 aaKnown RBP eCLIP16.8■□□□□ 0.28
CD48-203ENST00000613788 BRAPQ7Z569 592 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 FAM133AQ8N9E0 248 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 NSUN6Q8TEA1 469 aaKnown RBP16.8■□□□□ 0.28
CD48-203ENST00000613788 ZNF296Q8WUU4 475 aaPredicted RBP16.8■□□□□ 0.28
CD48-203ENST00000613788 SOCS4Q8WXH5 440 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 TNFRSF25Q93038 417 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 TAAR1Q96RJ0 339 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 RMDN3Q96TC7 470 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 ANO3Q9BYT9 981 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 CHMP5Q9NZZ3 219 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 COL20A1Q9P218 1284 aa16.8■□□□□ 0.28
CD48-203ENST00000613788 PGK2P07205 417 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 CNTN2Q02246 1040 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 PKP1Q13835 747 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 MORN1Q5T089 497 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 ARHGEF16Q5VV41 709 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 PIK3AP1Q6ZUJ8 805 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 FERMT3Q86UX7 667 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 MPHOSPH6Q99547 160 aaKnown RBP16.79■□□□□ 0.28
CD48-203ENST00000613788 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
CD48-203ENST00000613788 DIS3Q9Y2L1 958 aaKnown RBP16.79■□□□□ 0.28
CD48-203ENST00000613788 CEP350Q5VT06 3117 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms