RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 RPTORQ8N122 1335 aa19.2■□□□□ 0.66
IRF1-211ENST00000613424 BRCA2P51587 3418 aa19.19■□□□□ 0.66
IRF1-211ENST00000613424 CFBP00751 764 aa19.19■□□□□ 0.66
IRF1-211ENST00000613424 PRAMEF19Q5SWL8 479 aa19.19■□□□□ 0.66
IRF1-211ENST00000613424 MAMDC4Q6UXC1 1216 aa19.19■□□□□ 0.66
IRF1-211ENST00000613424 PHKBQ93100 1093 aa19.19■□□□□ 0.66
IRF1-211ENST00000613424 TMEM106CQ9BVX2 250 aa19.19■□□□□ 0.66
IRF1-211ENST00000613424 RNF208Q9H0X6 261 aa19.19■□□□□ 0.66
IRF1-211ENST00000613424 SLKQ9H2G2 1235 aaPredicted RBP19.19■□□□□ 0.66
IRF1-211ENST00000613424 HMX1Q9NP08 348 aaPredicted RBP19.19■□□□□ 0.66
IRF1-211ENST00000613424 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
IRF1-211ENST00000613424 PFKFB2O60825 505 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 PPFIA3O75145 1194 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 IFNAR1P17181 557 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 SCRN1Q12765 414 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 RABEP1Q15276 862 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 ME3Q16798 604 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 TRPV1Q8NER1 839 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 SYTL5Q8TDW5 730 aaPredicted RBP19.18■□□□□ 0.66
IRF1-211ENST00000613424 ASTN1O14525 1302 aa19.18■□□□□ 0.66
IRF1-211ENST00000613424 CPLX1O14810 134 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 SNAI1O95863 264 aaPredicted RBP19.17■□□□□ 0.66
IRF1-211ENST00000613424 CCND3P30281 292 aaPredicted RBP19.17■□□□□ 0.66
IRF1-211ENST00000613424 HSD17B4P51659 736 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 GHRHRQ02643 423 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 WWC2Q6AWC2 1192 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 HEATR3Q7Z4Q2 680 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 SAMD3Q8N6K7 520 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 GPKOWQ92917 476 aaPredicted RBP eCLIP19.17■□□□□ 0.66
IRF1-211ENST00000613424 TAAR1Q96RJ0 339 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 MAP3K20Q9NYL2 800 aaKnown RBP19.17■□□□□ 0.66
IRF1-211ENST00000613424 COL20A1Q9P218 1284 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 ADD3Q9UEY8 706 aaKnown RBP19.17■□□□□ 0.66
IRF1-211ENST00000613424 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
IRF1-211ENST00000613424 LCTP09848 1927 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 ASB14A6NK59 587 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 GCOM1H8Y6P7 765 aaPredicted RBP19.16■□□□□ 0.66
IRF1-211ENST00000613424 LARGE1O95461 756 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 POLR2MP0CAP2 368 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 CYBAP13498 195 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 AKAP17AQ02040 695 aaKnown RBP19.16■□□□□ 0.66
IRF1-211ENST00000613424 PKN1Q16512 942 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 PFKFB3Q16875 520 aaPredicted RBP19.16■□□□□ 0.66
IRF1-211ENST00000613424 ARMCX2Q7L311 632 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 DNERQ8NFT8 737 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 SLC26A6Q9BXS9 759 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
IRF1-211ENST00000613424 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.16■□□□□ 0.66
IRF1-211ENST00000613424 PAK6Q9NQU5 681 aaPredicted RBP19.16■□□□□ 0.66
IRF1-211ENST00000613424 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.16■□□□□ 0.66
IRF1-211ENST00000613424 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
IRF1-211ENST00000613424 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
IRF1-211ENST00000613424 GJB1P08034 283 aa19.15■□□□□ 0.66
IRF1-211ENST00000613424 CNGA1P29973 690 aa19.15■□□□□ 0.66
IRF1-211ENST00000613424 HOXA13P31271 388 aaPredicted RBP19.15■□□□□ 0.66
IRF1-211ENST00000613424 ALDH5A1P51649 535 aaPredicted RBP19.15■□□□□ 0.66
IRF1-211ENST00000613424 SSRP1Q08945 709 aaKnown RBP19.15■□□□□ 0.66
IRF1-211ENST00000613424 CPLX2Q6PUV4 134 aaKnown RBP19.15■□□□□ 0.66
IRF1-211ENST00000613424 NECAB1Q8N987 351 aa19.15■□□□□ 0.66
IRF1-211ENST00000613424 RBM27Q9P2N5 1060 aaKnown RBP19.15■□□□□ 0.66
IRF1-211ENST00000613424 NRBP1Q9UHY1 535 aa19.15■□□□□ 0.66
IRF1-211ENST00000613424 POTEFA5A3E0 1075 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 STXBP3O00186 592 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 ZNF865P0CJ78 1059 aaPredicted RBP19.14■□□□□ 0.65
IRF1-211ENST00000613424 SCG2P13521 617 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 SOX10P56693 466 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 MORC4Q8TE76 937 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 DEFB118Q96PH6 123 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 RMDN3Q96TC7 470 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 PSTPIP2Q9H939 334 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 BARHL2Q9NY43 387 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 CNPY2Q9Y2B0 182 aa19.14■□□□□ 0.65
IRF1-211ENST00000613424 LOC102724159A0A0B4J2E5 919 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 hCG_1984214I3L0E3 225 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 MEIS2O14770 477 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 CAPN15O75808 1086 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 SGPL1O95470 568 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 NAPAP54920 295 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 ACVR2BQ13705 512 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 PWP2Q15269 919 aaKnown RBP19.13■□□□□ 0.65
IRF1-211ENST00000613424 USP17L6PQ6QN14 398 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 ZNF713Q8N859 430 aaPredicted RBP19.13■□□□□ 0.65
IRF1-211ENST00000613424 IL27Q8NEV9 243 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 NSUN6Q8TEA1 469 aaKnown RBP19.13■□□□□ 0.65
IRF1-211ENST00000613424 GTF3C6Q969F1 213 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 KATNBL1Q9H079 304 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 ABHD16BQ9H3Z7 469 aa19.13■□□□□ 0.65
IRF1-211ENST00000613424 RBBP6Q7Z6E9 1792 aaKnown RBP19.13■□□□□ 0.65
IRF1-211ENST00000613424 MCM3APO60318 1980 aa19.12■□□□□ 0.65
IRF1-211ENST00000613424 PIK3CDO00329 1044 aa19.12■□□□□ 0.65
IRF1-211ENST00000613424 CTDNEP1O95476 244 aa19.12■□□□□ 0.65
IRF1-211ENST00000613424 EN2P19622 333 aaPredicted RBP19.12■□□□□ 0.65
IRF1-211ENST00000613424 GJA8P48165 433 aa19.12■□□□□ 0.65
IRF1-211ENST00000613424 ARHGEF16Q5VV41 709 aa19.12■□□□□ 0.65
IRF1-211ENST00000613424 PPP1R18Q6NYC8 613 aa19.12■□□□□ 0.65
IRF1-211ENST00000613424 FCHSD1Q86WN1 690 aa19.12■□□□□ 0.65
IRF1-211ENST00000613424 U2AF1L4Q8WU68 220 aaKnown RBP19.12■□□□□ 0.65
IRF1-211ENST00000613424 CUL5Q93034 780 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms