RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ANKRD20A12PQ8NF67 263 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 GPKOWQ92917 476 aaPredicted RBP eCLIP16.52■□□□□ 0.23
CDH1-213ENST00000612417 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.23
CDH1-213ENST00000612417 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 NFKBIEO00221 500 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 PARP1P09874 1014 aaKnown RBP16.51■□□□□ 0.23
CDH1-213ENST00000612417 STAT6P42226 847 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 FXR1P51114 621 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH1-213ENST00000612417 COPB1P53618 953 aaKnown RBP16.51■□□□□ 0.23
CDH1-213ENST00000612417 FAM193AP78312 1265 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 KCNB1Q14721 858 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 SH3BP5LQ7L8J4 393 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 BARHL2Q9NY43 387 aa16.51■□□□□ 0.23
CDH1-213ENST00000612417 N4BP3O15049 544 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 ATP8B1O43520 1251 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 ENTPD3O75355 529 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 PNMA6AP0CW24 399 aaPredicted RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 PRPHP41219 470 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 KARSQ15046 597 aaKnown RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 SLC35G1Q2M3R5 365 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 NAALADL2Q58DX5 795 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 WWC2Q6AWC2 1192 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 TMCO3Q6UWJ1 677 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 DTHD1Q6ZMT9 781 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 TMTC1Q8IUR5 882 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 PCDHA6Q9UN73 950 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 PCDHA8Q9Y5H6 950 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 PLIN4Q96Q06 1357 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 PALM3A6NDB9 673 aaPredicted RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 KCNJ18B7U540 433 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 H7C1D1 291 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 STXBP3O00186 592 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 CYTH3O43739 400 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 TTLL1O95922 423 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 CCT6AP40227 531 aaKnown RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 KCNJ12Q14500 433 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 TNIP1Q15025 636 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 CERKLQ49MI3 558 aaPredicted RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 USP17L2Q6R6M4 530 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 RABGGTAQ92696 567 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
CDH1-213ENST00000612417 ZNF70Q9UC06 446 aaPredicted RBP16.5■□□□□ 0.23
CDH1-213ENST00000612417 PRCPP42785 496 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 ADSSL1Q8N142 457 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 CPLX3Q8WVH0 158 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 CSRNP1Q96S65 589 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 DNAJC18Q9H819 358 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 ABHD10Q9NUJ1 306 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 KIF5CO60282 957 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 RASSF7Q02833 373 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 TERF2Q15554 542 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 RASGRP4Q8TDF6 673 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 SPZ1Q9BXG8 430 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 MAGEF1Q9HAY2 307 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
CDH1-213ENST00000612417 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 IGKV6D-41A0A0C4DH26 115 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 USP17L5A8MUK1 530 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 GOLGA1Q92805 767 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 CUEDC2Q9H467 287 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 LZTFL1Q9NQ48 299 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
CDH1-213ENST00000612417 KLRC4O43908 158 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 RHOBTB3O94955 611 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 CDC25AP30304 524 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 NOVP48745 357 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 IRF2BP1Q8IU81 584 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 AK8Q96MA6 479 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 IRX2Q9BZI1 471 aaPredicted RBP16.47■□□□□ 0.23
CDH1-213ENST00000612417 ZMYND12Q9H0C1 365 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 CPVLQ9H3G5 476 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 TAB2Q9NYJ8 693 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 MYO1AQ9UBC5 1043 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 EEF1GP26641 437 aaKnown RBP16.47■□□□□ 0.23
CDH1-213ENST00000612417 ERVK-24P63145 666 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 INF2Q27J81 1249 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 VPS16Q9H269 839 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
CDH1-213ENST00000612417 FRMPD2Q68DX3 1309 aaPredicted RBP16.47■□□□□ 0.23
CDH1-213ENST00000612417 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 RAD21O60216 631 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 COBLO75128 1261 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 SMARCA1P28370 1054 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms