RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 FASTKD5Q7L8L6 764 aaKnown RBP22.36■■□□□ 1.17
SRRM3-205ENST00000612155 DHX40Q8IX18 779 aaKnown RBP22.36■■□□□ 1.17
SRRM3-205ENST00000612155 P2RX7Q99572 595 aaKnown RBP22.36■■□□□ 1.17
SRRM3-205ENST00000612155 TTC12Q9H892 705 aaPredicted RBP22.36■■□□□ 1.17
SRRM3-205ENST00000612155 SMCHD1A6NHR9 2005 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 IGF2BP3O00425 579 aaKnown RBP eCLIP22.35■■□□□ 1.17
SRRM3-205ENST00000612155 BTNL9Q6UXG8 535 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 CCDC102AQ96A19 550 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 SPZ1Q9BXG8 430 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 ASCC2Q9H1I8 757 aaPredicted RBP22.35■■□□□ 1.17
SRRM3-205ENST00000612155 FBXO2Q9UK22 296 aaPredicted RBP22.35■■□□□ 1.17
SRRM3-205ENST00000612155 RLFQ13129 1914 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 PDHXO00330 501 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 WNT7AO00755 349 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 CUTAO60888 179 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 PPP1R11O60927 126 aaPredicted RBP22.35■■□□□ 1.17
SRRM3-205ENST00000612155 AKAP17AQ02040 695 aaKnown RBP22.35■■□□□ 1.17
SRRM3-205ENST00000612155 CDC37Q16543 378 aaPredicted RBP22.35■■□□□ 1.17
SRRM3-205ENST00000612155 SPECC1Q5M775 1068 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 PLA2G4DQ86XP0 818 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 CHURC1Q8WUH1 139 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 PPP1R9AQ9ULJ8 1098 aa22.35■■□□□ 1.17
SRRM3-205ENST00000612155 PARP14Q460N5 1801 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 CAVIN2O95810 425 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 QRICH1Q2TAL8 776 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 CPXCR1Q8N123 301 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 PRPF38AQ8NAV1 312 aaKnown RBP22.34■■□□□ 1.17
SRRM3-205ENST00000612155 SPC24Q8NBT2 197 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 TNFRSF25Q93038 417 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 ANO10Q9NW15 660 aa22.34■■□□□ 1.17
SRRM3-205ENST00000612155 SPDYE16A6NNV3 312 aaPredicted RBP22.33■■□□□ 1.17
SRRM3-205ENST00000612155 SYKP43405 635 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 IRX3P78415 501 aaPredicted RBP22.33■■□□□ 1.17
SRRM3-205ENST00000612155 COG2Q14746 738 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 USH1GQ495M9 461 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 RILPL1Q5EBL4 403 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 COA7Q96BR5 231 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 RRP36Q96EU6 259 aaKnown RBP22.33■■□□□ 1.17
SRRM3-205ENST00000612155 HHIPL1Q96JK4 782 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 PKNOX2Q96KN3 472 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 LZTS2Q9BRK4 669 aa22.33■■□□□ 1.17
SRRM3-205ENST00000612155 ZNF75DP51815 510 aa22.33■■□□□ 1.16
SRRM3-205ENST00000612155 DPCR1Q3MIW9 517 aa22.33■■□□□ 1.16
SRRM3-205ENST00000612155 ATP2B1P20020 1258 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 PTPREP23469 700 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 HOXA7P31268 230 aaPredicted RBP22.32■■□□□ 1.16
SRRM3-205ENST00000612155 DSG3P32926 999 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 VEGFBP49765 207 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 C1QTNF8P60827 252 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 HEATR3Q7Z4Q2 680 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 FAM160B2Q86V87 743 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 KRI1Q8N9T8 703 aaKnown RBP22.32■■□□□ 1.16
SRRM3-205ENST00000612155 TIGD1Q96MW7 591 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 KCNF1Q9H3M0 494 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 RAVER2Q9HCJ3 691 aaKnown RBP22.32■■□□□ 1.16
SRRM3-205ENST00000612155 TYW1BQ6NUM6 668 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 AGBL1Q96MI9 1066 aa22.32■■□□□ 1.16
SRRM3-205ENST00000612155 COL11A1P12107 1806 aaPredicted RBP22.31■■□□□ 1.16
SRRM3-205ENST00000612155 MANSC4A6NHS7 340 aaPredicted RBP22.31■■□□□ 1.16
SRRM3-205ENST00000612155 BIN1O00499 593 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 VWA5AO00534 786 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 KRT2P35908 639 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 LONRF3Q496Y0 759 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 WWC2Q6AWC2 1192 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 PAGR1Q9BTK6 254 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 SEC63Q9UGP8 760 aaKnown RBP22.31■■□□□ 1.16
SRRM3-205ENST00000612155 ZBTB5O15062 677 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 ECM2O94769 699 aaPredicted RBP22.31■■□□□ 1.16
SRRM3-205ENST00000612155 MTMR8Q96EF0 704 aa22.31■■□□□ 1.16
SRRM3-205ENST00000612155 SCG2P13521 617 aa22.3■■□□□ 1.16
SRRM3-205ENST00000612155 HERVK_113P62684 666 aa22.3■■□□□ 1.16
SRRM3-205ENST00000612155 PLS1Q14651 629 aa22.3■■□□□ 1.16
SRRM3-205ENST00000612155 PFKFB3Q16875 520 aaPredicted RBP22.3■■□□□ 1.16
SRRM3-205ENST00000612155 RANBP17Q9H2T7 1088 aaKnown RBP22.3■■□□□ 1.16
SRRM3-205ENST00000612155 KCNH3Q9ULD8 1083 aa22.3■■□□□ 1.16
SRRM3-205ENST00000612155 PLA2G6O60733 806 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 ANKRD23Q86SG2 305 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 SLC38A10Q9HBR0 1119 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 TXNRD2Q9NNW7 524 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 HOMER2Q9NSB8 354 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 BTBD7Q9P203 1132 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 ZNF536O15090 1300 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 PNMA6FA0A0J9YX94 578 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 TESPA1A2RU30 521 aaPredicted RBP22.29■■□□□ 1.16
SRRM3-205ENST00000612155 SMARCA1P28370 1054 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 TMEM132BQ14DG7 1078 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 USP49Q70CQ1 688 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 IFNL1Q8IU54 200 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 AOPEPQ8N6M6 819 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 TRIM5Q9C035 493 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 R3HDMLQ9H3Y0 253 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 HOXC10Q9NYD6 342 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 NRBP1Q9UHY1 535 aa22.29■■□□□ 1.16
SRRM3-205ENST00000612155 FOXN1O15353 648 aa22.28■■□□□ 1.16
SRRM3-205ENST00000612155 XBP1P17861 261 aa22.28■■□□□ 1.16
SRRM3-205ENST00000612155 OSBPP22059 807 aa22.28■■□□□ 1.16
SRRM3-205ENST00000612155 PNOCQ13519 176 aa22.28■■□□□ 1.16
SRRM3-205ENST00000612155 SMCR8Q8TEV9 937 aaPredicted RBP22.28■■□□□ 1.16
SRRM3-205ENST00000612155 TUBE1Q9UJT0 475 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms