RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 NAP1L4Q99733 375 aaKnown RBP13.38□□□□□ -0.27
SRRT-213ENST00000611405 TRIM34Q9BYJ4 488 aa13.38□□□□□ -0.27
SRRT-213ENST00000611405 DNAJC18Q9H819 358 aa13.38□□□□□ -0.27
SRRT-213ENST00000611405 FAM198AQ9UFP1 575 aa13.38□□□□□ -0.27
SRRT-213ENST00000611405 USP17L10C9JJH3 530 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 FECHP22830 423 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 TNNI2P48788 182 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 ASIC1P78348 528 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 SV2BQ7L1I2 683 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 CCDC94Q9BW85 323 aaPredicted RBP13.37□□□□□ -0.27
SRRT-213ENST00000611405 CGNQ9P2M7 1197 aaKnown RBP13.37□□□□□ -0.27
SRRT-213ENST00000611405 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
SRRT-213ENST00000611405 BICDL2A1A5D9 508 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 EDIL3O43854 480 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 TDP2O95551 362 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 GYPCP04921 128 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 CCDC175P0C221 793 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 CASP14P31944 242 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 SLC16A2P36021 539 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 PDE4DQ08499 809 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 KCTD1Q719H9 257 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 IRF2BP1Q8IU81 584 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
SRRT-213ENST00000611405 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 DDTLA6NHG4 134 aaPredicted RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 SLC37A4O43826 429 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 GCFC2P16383 781 aaKnown RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 TCP10Q12799 353 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 GRB10Q13322 594 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 TATDN1Q6P1N9 297 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 CNNM4Q6P4Q7 775 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 CDK5RAP3Q96JB5 506 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 CCNE1P24864 410 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 CACNB3P54284 484 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 UBE2SQ16763 222 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 SUPT20HQ8NEM7 779 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 P2RX5Q93086 422 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 SOWAHDA6NJG2 315 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 LGALS16A8MUM7 142 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 FXR1P51114 621 aaKnown RBP eCLIP13.36□□□□□ -0.27
SRRT-213ENST00000611405 PMS1P54277 932 aaKnown RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 UBXN1Q04323 297 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 NAA30Q147X3 362 aaPredicted RBP13.36□□□□□ -0.27
SRRT-213ENST00000611405 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 TMEM179Q6ZVK1 233 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 SH3BP5LQ7L8J4 393 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 TMTC1Q8IUR5 882 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 CREBRFQ8IUR6 639 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 PNMA5Q96PV4 448 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
SRRT-213ENST00000611405 A0A1W2PQC6 194 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 SLC1A4P43007 532 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 FAM114A1Q8IWE2 563 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
SRRT-213ENST00000611405 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
SRRT-213ENST00000611405 ADGRG1Q9Y653 693 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 PVALEFA0A1B0GWK0 134 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 CASQ1P31415 396 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 GNG11P61952 73 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 RAD9BQ6WBX8 426 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 MB21D1Q8N884 522 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
SRRT-213ENST00000611405 DESI2Q9BSY9 194 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
SRRT-213ENST00000611405 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
SRRT-213ENST00000611405 ENTPD3O75355 529 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 CHRNA5P30532 468 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 STK4Q13043 487 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 MTF1Q14872 753 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 CSGALNACT2Q8N6G5 542 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
SRRT-213ENST00000611405 RAD54LQ92698 747 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
SRRT-213ENST00000611405 AOC3Q16853 763 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 TMEM119Q4V9L6 283 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 MCTP2Q6DN12 878 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 ABHD10Q9NUJ1 306 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 MYH4Q9Y623 1939 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 SLX4Q8IY92 1834 aa13.34□□□□□ -0.27
SRRT-213ENST00000611405 FAM196BA6NMK8 535 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 SLC26A4O43511 780 aa13.33□□□□□ -0.27
SRRT-213ENST00000611405 URI1O94763 535 aaPredicted RBP13.33□□□□□ -0.27
SRRT-213ENST00000611405 RXRBP28702 533 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms