RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 HTATIP2Q9BUP3 242 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 FRMPD3Q5JV73 1810 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 RARBP10826 455 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 ALDH5A1P51649 535 aaPredicted RBP16.53■□□□□ 0.24
HDDC2-209ENST00000609477 PRAMEF19Q5SWL8 479 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 TMTC3Q6ZXV5 915 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
HDDC2-209ENST00000609477 IL17RAQ96F46 866 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 VTA1Q9NP79 307 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
HDDC2-209ENST00000609477 DNM1LO00429 736 aa16.52■□□□□ 0.24
HDDC2-209ENST00000609477 PPP1R11O60927 126 aaPredicted RBP16.52■□□□□ 0.24
HDDC2-209ENST00000609477 CALML3P27482 149 aa16.52■□□□□ 0.24
HDDC2-209ENST00000609477 HSD17B4P51659 736 aa16.52■□□□□ 0.24
HDDC2-209ENST00000609477 RTN1Q16799 776 aa16.52■□□□□ 0.24
HDDC2-209ENST00000609477 SLC30A10Q6XR72 485 aa16.52■□□□□ 0.24
HDDC2-209ENST00000609477 BRF1Q92994 677 aa16.52■□□□□ 0.24
HDDC2-209ENST00000609477 IWS1Q96ST2 819 aa16.52■□□□□ 0.24
HDDC2-209ENST00000609477 NID2Q14112 1375 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 ASTN1O14525 1302 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 LCTP09848 1927 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 DUSP11O75319 330 aaKnown RBP16.51■□□□□ 0.23
HDDC2-209ENST00000609477 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-209ENST00000609477 RXRAP19793 462 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 EDNRBP24530 442 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-209ENST00000609477 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
HDDC2-209ENST00000609477 PAWRQ96IZ0 340 aaKnown RBP16.51■□□□□ 0.23
HDDC2-209ENST00000609477 KATNBL1Q9H079 304 aa16.51■□□□□ 0.23
HDDC2-209ENST00000609477 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-209ENST00000609477 ZHX1Q9UKY1 873 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-209ENST00000609477 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
HDDC2-209ENST00000609477 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
HDDC2-209ENST00000609477 MCM3APO60318 1980 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 CFBP00751 764 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 CPA1P15085 419 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
HDDC2-209ENST00000609477 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDDC2-209ENST00000609477 CCDC144BQ3MJ40 725 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 RNF180Q86T96 592 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
HDDC2-209ENST00000609477 C11orf49Q9H6J7 331 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 SPC25Q9HBM1 224 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 XPNPEP3Q9NQH7 507 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 RBM27Q9P2N5 1060 aaKnown RBP16.5■□□□□ 0.23
HDDC2-209ENST00000609477 Q9Y3F1 56 aa16.5■□□□□ 0.23
HDDC2-209ENST00000609477 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 GCOM1H8Y6P7 765 aaPredicted RBP16.49■□□□□ 0.23
HDDC2-209ENST00000609477 OPLAHO14841 1288 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 POLR2MP0CAP2 368 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 COL6A1P12109 1028 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 NKX3-2P78367 333 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 PDE4DQ08499 809 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
HDDC2-209ENST00000609477 RMDN3Q96TC7 470 aa16.49■□□□□ 0.23
HDDC2-209ENST00000609477 TSEN34Q9BSV6 310 aaKnown RBP16.49■□□□□ 0.23
HDDC2-209ENST00000609477 RBM47A0AV96 593 aaKnown RBP16.48■□□□□ 0.23
HDDC2-209ENST00000609477 PIK3CDO00329 1044 aa16.48■□□□□ 0.23
HDDC2-209ENST00000609477 TNFAIP2Q03169 654 aa16.48■□□□□ 0.23
HDDC2-209ENST00000609477 FUT2Q10981 343 aa16.48■□□□□ 0.23
HDDC2-209ENST00000609477 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
HDDC2-209ENST00000609477 TAPT1Q6NXT6 567 aa16.48■□□□□ 0.23
HDDC2-209ENST00000609477 TBC1D5Q92609 795 aa16.48■□□□□ 0.23
HDDC2-209ENST00000609477 PURBQ96QR8 312 aaKnown RBP16.48■□□□□ 0.23
HDDC2-209ENST00000609477 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
HDDC2-209ENST00000609477 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
HDDC2-209ENST00000609477 CST5P28325 142 aaPredicted RBP16.47■□□□□ 0.23
HDDC2-209ENST00000609477 GJA9P57773 515 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 TOB2Q14106 344 aaPredicted RBP16.47■□□□□ 0.23
HDDC2-209ENST00000609477 LRRC41Q15345 812 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 STXBP2Q15833 593 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
HDDC2-209ENST00000609477 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 CUL5Q93034 780 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 TAAR1Q96RJ0 339 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 UPF3AQ9H1J1 476 aaKnown RBP16.47■□□□□ 0.23
HDDC2-209ENST00000609477 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
HDDC2-209ENST00000609477 LRRC37A2A6NM11 1700 aa16.47■□□□□ 0.23
HDDC2-209ENST00000609477 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 NKRFO15226 690 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 ADAMTS4O75173 837 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 CDC27P30260 824 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 C8orf34Q49A92 452 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms