RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 GALNT17Q6IS24 598 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 CCDC197Q8NCU1 140 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 P3H4Q92791 437 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-218ENST00000608440 SLC12A6Q9UHW9 1150 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 ASB3Q9Y575 518 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-218ENST00000608440 CEMIPQ8WUJ3 1361 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 F8W031 263 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-218ENST00000608440 KRT86O43790 486 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 TATP17735 454 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-218ENST00000608440 FECHP22830 423 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 PAX3P23760 479 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 TRADDQ15628 312 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-218ENST00000608440 TEX9Q8N6V9 391 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 EAF2Q96CJ1 260 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-218ENST00000608440 DLGAP2Q9P1A6 1054 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 SLC12A4Q9UP95 1085 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 UBN2Q6ZU65 1347 aa13.87□□□□□ -0.19
CTCFL-218ENST00000608440 AHDC1Q5TGY3 1603 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-218ENST00000608440 C5orf60A6NFR6 353 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 SRRM3A6NNA2 597 aaPredicted RBP13.86□□□□□ -0.19
CTCFL-218ENST00000608440 GCOM1H8Y6P7 765 aaPredicted RBP13.86□□□□□ -0.19
CTCFL-218ENST00000608440 MYZAPP0CAP1 466 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 NQO1P15559 274 aaKnown RBP13.86□□□□□ -0.19
CTCFL-218ENST00000608440 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
CTCFL-218ENST00000608440 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
CTCFL-218ENST00000608440 TMBIM4Q9HC24 238 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 RHBDL2Q9NX52 303 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 WDR17Q8IZU2 1322 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 NPTXRO95502 500 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 DRD4P21917 467 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 CASP1P29466 404 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 KCTD19Q17RG1 926 aaPredicted RBP13.86□□□□□ -0.19
CTCFL-218ENST00000608440 TTC39AQ5SRH9 613 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 SPATA1Q5VX52 437 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 NFRKBQ6P4R8 1299 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 MDM1Q8TC05 714 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 AIFM3Q96NN9 605 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 TAB2Q9NYJ8 693 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 ANKIB1Q9P2G1 1089 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 MYH8P13535 1937 aa13.86□□□□□ -0.19
CTCFL-218ENST00000608440 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTCFL-218ENST00000608440 PARP1P09874 1014 aaKnown RBP13.85□□□□□ -0.19
CTCFL-218ENST00000608440 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
CTCFL-218ENST00000608440 STAT6P42226 847 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 CYP27A1Q02318 531 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 SDCCAG8Q86SQ7 713 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-218ENST00000608440 SLX1AQ9BQ83 275 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 RBM12Q9NTZ6 932 aaKnown RBP13.85□□□□□ -0.19
CTCFL-218ENST00000608440 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 SNX12Q9UMY4 172 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 DCDC2CA8MYV0 355 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 ZPR1O75312 459 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 ALADP13716 330 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 LMNTD2Q8IXW0 634 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 CTAGE1Q96RT6 745 aa13.85□□□□□ -0.19
CTCFL-218ENST00000608440 ZMYND8Q9ULU4 1186 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-218ENST00000608440 hCG_2014768A0A024R1R8 64 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 CFAP73A6NFT4 308 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 HEXIM1O94992 359 aaKnown RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 KRT16P08779 473 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 DNA2P51530 1060 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 GRIN1Q05586 938 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 ANKS4BQ8N8V4 417 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 FGD4Q96M96 766 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 KCNMB3Q9NPA1 279 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 NOVA2Q9UNW9 492 aaKnown RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 LRRC10BA6NIK2 292 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 RNMTO43148 476 aaKnown RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 PTPAQ15257 358 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 CD302Q8IX05 232 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 SLC17A8Q8NDX2 589 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 PHC3Q8NDX5 983 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 IQCGQ9H095 443 aaKnown RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 ZWILCHQ9H900 591 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 ABCF3Q9NUQ8 709 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 SP100P23497 879 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 EVA1CP58658 441 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 PPP2R2AP63151 447 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 MRPS35P82673 323 aaKnown RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 DYNC1I2Q13409 638 aaKnown RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 KRT31Q15323 416 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 PROCA1Q8NCQ7 364 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-218ENST00000608440 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 NDNQ99608 321 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 LZTS2Q9BRK4 669 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 ADAM22Q9P0K1 906 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 LNPEPQ9UIQ6 1025 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 PHF24Q9UPV7 400 aa13.84□□□□□ -0.19
CTCFL-218ENST00000608440 TTC26A0AVF1 554 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 CPLX1O14810 134 aa13.83□□□□□ -0.2
CTCFL-218ENST00000608440 NCK2O43639 380 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms