RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
CTSA-214ENST00000606788 ZBTB9Q96C00 473 aa17.87■□□□□ 0.45
CTSA-214ENST00000606788 ZHX3Q9H4I2 956 aa17.87■□□□□ 0.45
CTSA-214ENST00000606788 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
CTSA-214ENST00000606788 A0A1W2PRG0 241 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 DPEP1P16444 411 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 ECM1Q16610 540 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
CTSA-214ENST00000606788 PCNTO95613 3336 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 A0A1B0GTH6 734 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 KLRC4O43908 158 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 UBXN1Q04323 297 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 KIF18AQ8NI77 898 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 CUL5Q93034 780 aa17.86■□□□□ 0.45
CTSA-214ENST00000606788 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
CTSA-214ENST00000606788 NDUFB10O96000 172 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 SNHG28P0DPA3 235 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 FILIP1LQ4L180 1135 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 TMEM139Q8IV31 216 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 TMEM39BQ9GZU3 492 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 EXOC1Q9NV70 894 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 CDKAL1Q5VV42 579 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 STYK1Q6J9G0 422 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 CALML4Q96GE6 196 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 P2RX7Q99572 595 aaKnown RBP17.85■□□□□ 0.45
CTSA-214ENST00000606788 TRIM9Q9C026 710 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.85■□□□□ 0.45
CTSA-214ENST00000606788 FANCGO15287 622 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 KLK7P49862 253 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 GRB10Q13322 594 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 C7orf43Q8WVR3 580 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 PPP2R2CQ9Y2T4 447 aa17.85■□□□□ 0.45
CTSA-214ENST00000606788 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 COPB1P53618 953 aaKnown RBP17.84■□□□□ 0.45
CTSA-214ENST00000606788 NPHP3-ACAD11A0A0J9YXS1 232 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 AKR1B15C9JRZ8 316 aaPredicted RBP17.84■□□□□ 0.45
CTSA-214ENST00000606788 URI1O94763 535 aaPredicted RBP17.84■□□□□ 0.45
CTSA-214ENST00000606788 TBC1D5Q92609 795 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 PCMTD1Q96MG8 357 aaPredicted RBP17.84■□□□□ 0.45
CTSA-214ENST00000606788 CAMKK2Q96RR4 588 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 CCSER1Q9C0I3 900 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 KANSL2Q9H9L4 492 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 KBTBD4Q9NVX7 518 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 TFR2Q9UP52 801 aa17.84■□□□□ 0.45
CTSA-214ENST00000606788 MYMKA6NI61 221 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 SPDYE4A6NLX3 237 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 MEIS1O00470 390 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 TBX2Q13207 712 aaPredicted RBP17.83■□□□□ 0.45
CTSA-214ENST00000606788 DGKZQ13574 1117 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 PRR16Q569H4 304 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 TCP11X2Q5H9J9 407 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 KIAA1755Q5JYT7 1200 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 TRMT1LQ7Z2T5 733 aaKnown RBP17.83■□□□□ 0.45
CTSA-214ENST00000606788 CYP2W1Q8TAV3 490 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 PNMA5Q96PV4 448 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 RMND1Q9NWS8 449 aa17.83■□□□□ 0.45
CTSA-214ENST00000606788 ABL1P00519 1130 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 GYPCP04921 128 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 GNG11P61952 73 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 GPATCH4Q5T3I0 446 aaKnown RBP17.83■□□□□ 0.44
CTSA-214ENST00000606788 IRF2BP1Q8IU81 584 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 ADSSL1Q8N142 457 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 CSGALNACT2Q8N6G5 542 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 GLIS2Q9BZE0 524 aaPredicted RBP17.83■□□□□ 0.44
CTSA-214ENST00000606788 RWDD2AQ9UIY3 292 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 MYH8P13535 1937 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 B4DLN1 442 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 TULP1O00294 542 aaPredicted RBP17.83■□□□□ 0.44
CTSA-214ENST00000606788 NOVP48745 357 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 MRPL12P52815 198 aaKnown RBP17.83■□□□□ 0.44
CTSA-214ENST00000606788 NCBP1Q09161 790 aaKnown RBP17.83■□□□□ 0.44
CTSA-214ENST00000606788 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 RAD9BQ6WBX8 426 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 TTLL6Q8N841 843 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 ZSWIM4Q9H7M6 989 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 MRPL44Q9H9J2 332 aaKnown RBP17.83■□□□□ 0.44
CTSA-214ENST00000606788 RIC8AQ9NPQ8 531 aa17.83■□□□□ 0.44
CTSA-214ENST00000606788 E9PMD0 336 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 DLGAP5Q15398 846 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 ANKRD40Q6AI12 368 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 ACRBPQ8NEB7 543 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 HAS1Q92839 578 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 WDR24Q96S15 920 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 BLOC1S4Q9NUP1 217 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 REXO1L1PQ8IX06 675 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 KIFC2Q96AC6 838 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 CCDC17Q96LX7 622 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 DHX36Q9H2U1 1008 aaKnown RBP17.82■□□□□ 0.44
CTSA-214ENST00000606788 LRRC37AA6NMS7 1700 aa17.82■□□□□ 0.44
CTSA-214ENST00000606788 PSMA7O14818 248 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 ELF2Q15723 593 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 KRT79Q5XKE5 535 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 MTMR9Q96QG7 549 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 EPC1Q9H2F5 836 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 PCDHA12Q9UN75 941 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 PAXBP1Q9Y5B6 917 aa17.81■□□□□ 0.44
CTSA-214ENST00000606788 POTEB3A0JP26 581 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 491.2 ms