RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 LCTP09848 1927 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 LOC102724159A0A0B4J2E5 919 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 PGK1P00558 417 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 CALM1P0DP23 149 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 CALM2P0DP24 149 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 CALM3P0DP25 149 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 EDNRBP24530 442 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 GHRHRQ02643 423 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 PWP2Q15269 919 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 TAPT1Q6NXT6 567 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 APOA5Q6Q788 366 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 MCF2L2Q86YR7 1114 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 CMTR1Q8N1G2 835 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 DNERQ8NFT8 737 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 SYTL5Q8TDW5 730 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 DPF3Q92784 378 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 LZTS2Q9BRK4 669 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 XPNPEP3Q9NQH7 507 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 FRMPD3Q5JV73 1810 aa14.85□□□□□ -0.03
SHROOM1-207ENST00000606676 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 ADAMTS4O75173 837 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 DUSP11O75319 330 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 GNAQP50148 359 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 HSD17B4P51659 736 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 PRPF38BQ5VTL8 546 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 BLOC1S2Q6QNY1 142 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 Q6ZUG5 572 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 MICU3Q86XE3 530 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 TAAR1Q96RJ0 339 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 SENP6Q9GZR1 1112 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 PDGFCQ9NRA1 345 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 SYNRGQ9UMZ2 1314 aa14.84□□□□□ -0.03
SHROOM1-207ENST00000606676 RPS6KB1P23443 525 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 ADCYAP1R1P41586 468 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 IRX5P78411 483 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 TMEM63BQ5T3F8 832 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 EEPD1Q7L9B9 569 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 FBXO16Q8IX29 292 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 FBXL16Q8N461 479 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 KLHDC9Q8NEP7 349 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 VTA1Q9NP79 307 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 FAM217BQ9NTX9 383 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 CEP290O15078 2479 aa14.83□□□□□ -0.04
SHROOM1-207ENST00000606676 MCM3APO60318 1980 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 KLF18A0A0U1RQI7 1052 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 MYADML2A6NDP7 307 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 H0YGN5 161 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 CTAGE5O15320 804 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 ZBTB43O43298 467 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 CFBP00751 764 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 PTGS1P23219 599 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 PSMA5P28066 241 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 TNFAIP2Q03169 654 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 FUT2Q10981 343 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 TRAF1Q13077 416 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 LRRC26Q2I0M4 334 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 CCSAPQ6IQ19 270 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 SYNE3Q6ZMZ3 975 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 UPF3AQ9H1J1 476 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 ZSWIM6Q9HCJ5 1215 aa14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 GNEQ9Y223 722 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 BAZ2BQ9UIF8 2168 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-207ENST00000606676 hCG_1642624A0A1W2PR95 340 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 RBM47A0AV96 593 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 KBTBD13C9JR72 458 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 EVI5O60447 810 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 SMPD1P17405 629 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 GJA9P57773 515 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 NKX3-2P78367 333 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 PDE4DQ08499 809 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 APOBRQ0VD83 1088 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 IQSEC1Q6DN90 963 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 RUFY3Q7L099 469 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 RNF180Q86T96 592 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 CCDC82Q8N4S0 544 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 NSUN6Q8TEA1 469 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 BRF1Q92994 677 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 RMDN3Q96TC7 470 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 MAP3K20Q9NYL2 800 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 PHF24Q9UPV7 400 aa14.81□□□□□ -0.04
SHROOM1-207ENST00000606676 LRRC37A2A6NM11 1700 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 CST5P28325 142 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 CDC27P30260 824 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 HOXA13P31271 388 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 RCAN1P53805 252 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 ATN1P54259 1190 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 FGD1P98174 961 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 RTN1Q16799 776 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 SAMD3Q8N6K7 520 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 FERMT2Q96AC1 680 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 TSEN34Q9BSV6 310 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 TM6SF1Q9BZW5 370 aa14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 RBM28Q9NW13 759 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-207ENST00000606676 NR2E3Q9Y5X4 410 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms