RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 API5Q9BZZ5 524 aaKnown RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 OSBPL5Q9H0X9 879 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 TNKS2Q9H2K2 1166 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 IFT57Q9NWB7 429 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ADAM21Q9UKJ8 722 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 TPX2Q9ULW0 747 aaKnown RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 LRRFIP2Q9Y608 721 aaKnown RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 MRVI1Q9Y6F6 885 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ERVK-7P63135 1459 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 PTPRTO14522 1441 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ANKRD33BA6NCL7 494 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 DCDC2CA8MYV0 355 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 IGF2BP3O00425 579 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 SMARCA5O60264 1052 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 VAMP4O75379 141 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 TSPAN15O95858 294 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 F13A1P00488 732 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 GLI1P08151 1106 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 ERCC3P19447 782 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 USP8P40818 1118 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 MESP2Q0VG99 397 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 SMC1AQ14683 1233 aaKnown RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 BRD3Q15059 726 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 ELF2Q15723 593 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 PDZD3Q86UT5 571 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 MORC1Q86VD1 984 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 AEBP1Q8IUX7 1158 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 SPACA3Q8IXA5 215 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 DHX37Q8IY37 1157 aaKnown RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 EFCAB13Q8IY85 973 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 TBC1D22AQ8WUA7 517 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 SMARCE1Q969G3 411 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 CCDC120Q96HB5 630 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZSCAN31Q96LW9 406 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 BCL2L13Q9BXK5 485 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 BCO2Q9BYV7 579 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 SRCIN1Q9C0H9 1055 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZSCAN16Q9H4T2 348 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 CARS2Q9HA77 564 aaKnown RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 DDX19AQ9NUU7 478 aaKnown RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 ORC3Q9UBD5 711 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 LCMT1Q9UIC8 334 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 CTNND2Q9UQB3 1225 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 KIAA0556O60303 1618 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 PRG4Q92954 1404 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 PHLPP2Q6ZVD8 1323 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 TTC21BQ7Z4L5 1316 aa4.71□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZNF503-AS2A6NEH8 195 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 EIF3CLB5ME19 914 aaKnown RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 CTAGE5O15320 804 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 STX6O43752 255 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 TBC1D8O95759 1140 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZNF853P0CG23 659 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 SKILP12757 684 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 MTHFSP49914 203 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 EIF5P55010 431 aaKnown RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 ETF1P62495 437 aaKnown RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 ST5P78524 1137 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 CCZ1BP86790 482 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 CCZ1P86791 482 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 DDR1Q08345 913 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 LRMPQ12912 555 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 TUBB2AQ13885 445 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 IQCB1Q15051 598 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZRSR1Q15695 479 aaKnown RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 ERCC6LQ2NKX8 1250 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 LRRFIP1Q32MZ4 808 aaKnown RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 RGL3Q3MIN7 710 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 GIMAP6Q6P9H5 292 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 TPTE2Q6XPS3 522 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 SPC24Q8NBT2 197 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 UBXN4Q92575 508 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 RABGGTAQ92696 567 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 HEXIM2Q96MH2 286 aaKnown RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 DIRC2Q96SL1 478 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 EIF3CQ99613 913 aaKnown RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 TUBB2BQ9BVA1 445 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 FUT8Q9BYC5 575 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 TRIM5Q9C035 493 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 BIN2Q9UBW5 565 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 STAP2Q9UGK3 403 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 NRBP1Q9UHY1 535 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 SUFUQ9UMX1 484 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 PCDHA4Q9UN74 947 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 MAPK8IP1Q9UQF2 711 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 ADGRL3Q9HAR2 1447 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 AOX1Q06278 1338 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 TTC41PQ6P2S7 1318 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 PITPNM2Q9BZ72 1349 aa4.7□□□□□ -1.66
HMGB1P50-201ENST00000605814 FANCAO15360 1455 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 MSH6P52701 1360 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ABCA9Q8IUA7 1624 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 EFCAB6Q5THR3 1501 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 PRAMEF27A3QJZ7 478 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CCDC151A5D8V7 595 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 TMCO5BA8MYB1 307 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 FANCGO15287 622 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms