RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ADCYAP1R1P41586 468 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 LIFRP42702 1097 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 LRRC26Q2I0M4 334 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 DHX32Q7L7V1 743 aaKnown RBP16.73■□□□□ 0.27
TUBE1-208ENST00000604743 MCF2L2Q86YR7 1114 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
TUBE1-208ENST00000604743 MTMR8Q96EF0 704 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 PDGFCQ9NRA1 345 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 PCDHA1Q9Y5I3 950 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 SYNRGQ9UMZ2 1314 aa16.72■□□□□ 0.27
TUBE1-208ENST00000604743 DUSP11O75319 330 aaKnown RBP16.72■□□□□ 0.27
TUBE1-208ENST00000604743 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
TUBE1-208ENST00000604743 EXOSC10Q01780 885 aaKnown RBP16.72■□□□□ 0.27
TUBE1-208ENST00000604743 TNFAIP2Q03169 654 aa16.72■□□□□ 0.27
TUBE1-208ENST00000604743 SYNE3Q6ZMZ3 975 aa16.72■□□□□ 0.27
TUBE1-208ENST00000604743 RGS22Q8NE09 1264 aa16.72■□□□□ 0.27
TUBE1-208ENST00000604743 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
TUBE1-208ENST00000604743 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
TUBE1-208ENST00000604743 ZMYND8Q9ULU4 1186 aaPredicted RBP16.72■□□□□ 0.27
TUBE1-208ENST00000604743 SNX14Q9Y5W7 946 aa16.72■□□□□ 0.27
TUBE1-208ENST00000604743 PNMA6FA0A0J9YX94 578 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 C6orf222P0C671 652 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-208ENST00000604743 CALM1P0DP23 149 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 CALM2P0DP24 149 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 CALM3P0DP25 149 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 SYN1P17600 705 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 FGD1P98174 961 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 PDE4DQ08499 809 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 MICU3Q86XE3 530 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-208ENST00000604743 MPHOSPH6Q99547 160 aaKnown RBP16.71■□□□□ 0.27
TUBE1-208ENST00000604743 MAP3K14Q99558 947 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 SPC25Q9HBM1 224 aa16.71■□□□□ 0.27
TUBE1-208ENST00000604743 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-208ENST00000604743 MYADML2A6NDP7 307 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
TUBE1-208ENST00000604743 PTGS1P23219 599 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 GNAQP50148 359 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 TMEM63BQ5T3F8 832 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 SLC39A5Q6ZMH5 540 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
TUBE1-208ENST00000604743 DNERQ8NFT8 737 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 MORC4Q8TE76 937 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
TUBE1-208ENST00000604743 VTA1Q9NP79 307 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 COL20A1Q9P218 1284 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 ATP11BQ9Y2G3 1177 aa16.7■□□□□ 0.26
TUBE1-208ENST00000604743 B4DLN1 442 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 DYNC1LI2O43237 492 aaPredicted RBP16.69■□□□□ 0.26
TUBE1-208ENST00000604743 SMPD1P17405 629 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 HOXA13P31271 388 aaPredicted RBP16.69■□□□□ 0.26
TUBE1-208ENST00000604743 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
TUBE1-208ENST00000604743 RTP1P59025 263 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 BEX3Q00994 111 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 TRAF1Q13077 416 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 KCNA10Q16322 511 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 GNASQ5JWF2 1037 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 ARHGEF16Q5VV41 709 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 SGMS1Q86VZ5 419 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 KCNB2Q92953 911 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 RMDN3Q96TC7 470 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
TUBE1-208ENST00000604743 BRPF3Q9ULD4 1205 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 PHF24Q9UPV7 400 aa16.69■□□□□ 0.26
TUBE1-208ENST00000604743 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 LOC102724159A0A0B4J2E5 919 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 A0A1W2PQ45 241 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-208ENST00000604743 A0A1W2PQY0 241 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 OPLAHO14841 1288 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
TUBE1-208ENST00000604743 ACLYP53396 1101 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 GJA9P57773 515 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 PWP2Q15269 919 aaKnown RBP16.68■□□□□ 0.26
TUBE1-208ENST00000604743 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 Q6ZUG5 572 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
TUBE1-208ENST00000604743 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 WDR11Q9BZH6 1224 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
TUBE1-208ENST00000604743 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-208ENST00000604743 GNEQ9Y223 722 aaKnown RBP16.68■□□□□ 0.26
TUBE1-208ENST00000604743 GCOM1H8Y6P7 765 aaPredicted RBP16.67■□□□□ 0.26
TUBE1-208ENST00000604743 ZBTB43O43298 467 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms