RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 UIMC1Q96RL1 719 aa14.03□□□□□ -0.16
PDLIM1P1-201ENST00000604187 STRBPQ96SI9 672 aaKnown RBP14.03□□□□□ -0.16
PDLIM1P1-201ENST00000604187 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
PDLIM1P1-201ENST00000604187 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
PDLIM1P1-201ENST00000604187 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.16
PDLIM1P1-201ENST00000604187 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 IQCF3P0C7M6 154 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 KCNJ6P48051 423 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 SNAP25P60880 206 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 NBPF20Q3BBV1 942 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 DUSP28Q4G0W2 176 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 MUM1L1Q5H9M0 696 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 NSMFQ6X4W1 530 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 TMCO2Q7Z6W1 182 aaPredicted RBP14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 FAM160B2Q86V87 743 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ZNF444Q8N0Y2 327 aaPredicted RBP14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GJD3Q8N144 294 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 MTG1Q9BT17 334 aaPredicted RBP14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 UBE2ZQ9H832 354 aaPredicted RBP14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 MTUS1Q9ULD2 1270 aa14.02□□□□□ -0.17
PDLIM1P1-201ENST00000604187 BAIAP3O94812 1187 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 SSTR3P32745 418 aaPredicted RBP14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 SLC1A4P43007 532 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 TDO2P48775 406 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 MRE11P49959 708 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 CPT1AP50416 773 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GIMAP6Q6P9H5 292 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 CHURC1Q8WUH1 139 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 STAG1Q8WVM7 1258 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GMCL1Q96IK5 515 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 EPB41L4AQ9HCS5 686 aaPredicted RBP14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 NOD1Q9Y239 953 aa14.01□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ZNFX1Q9P2E3 1918 aaKnown RBP14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 KCNA5P22460 613 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 MCCP23508 829 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 WDR5P61964 334 aaKnown RBP14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 BFSP2Q13515 415 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 FAM178BQ8IXR5 827 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 OR6J1Q8NGC5 347 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PANK1Q8TE04 598 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 MORC4Q8TE76 937 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 LMCD1Q9NZU5 365 aa14□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PLIN4Q96Q06 1357 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 HMMRO75330 724 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 TSPY3P0CV98 308 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 TSPY8P0CW00 308 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 CHMP4BP1P59074 171 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 LEXMQ3ZCV2 418 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 BRDTQ58F21 947 aaPredicted RBP13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 NFRKBQ6P4R8 1299 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
PDLIM1P1-201ENST00000604187 RAB11FIP3O75154 756 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ALADP13716 330 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 IL9P15248 144 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ALDH5A1P51649 535 aaPredicted RBP13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 DEFB103AP81534 67 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 NHLH1Q02575 133 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 KCTD1Q719H9 257 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 RASGRP2Q7LDG7 609 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 SIRT2Q8IXJ6 389 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 SUGCTQ9HAC7 445 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ADD3Q9UEY8 706 aaKnown RBP13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 BRWD1Q9NSI6 2320 aa13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GREB1LQ9C091 1923 aaPredicted RBP13.98□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GBF1Q92538 1859 aa13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 RAD50Q92878 1312 aa13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 APPP05067 770 aa13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PTPN11Q06124 597 aaPredicted RBP13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PPP2R5BQ15173 497 aa13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 CCDC155Q8N6L0 562 aa13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 TGS1Q96RS0 853 aaKnown RBP13.97□□□□□ -0.17
PDLIM1P1-201ENST00000604187 BAZ2AQ9UIF9 1905 aaKnown RBP13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 RBM47A0AV96 593 aaKnown RBP13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 A6NJR5 290 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 NFIBO00712 420 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 GPAA1O43292 621 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PLA2G6O60733 806 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ICAM1P05362 532 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 ERVK-21P61565 698 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 TFAP4Q01664 338 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 PTGISQ16647 500 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 LRRFIP1Q32MZ4 808 aaKnown RBP13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 APPBP2Q92624 585 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 COPS5Q92905 334 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 SNX27Q96L92 541 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 RAD9AQ99638 391 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 STX8Q9UNK0 236 aa13.96□□□□□ -0.17
PDLIM1P1-201ENST00000604187 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms