RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PDGFCQ9NRA1 345 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 TRIM43BA6NCK2 446 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 CTAGE5O15320 804 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 SMPD1P17405 629 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 QRICH1Q2TAL8 776 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 ANKRD33Q7Z3H0 272 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 SH3RF1Q7Z6J0 888 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 DNERQ8NFT8 737 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 VTI1AQ96AJ9 217 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 TRIM43Q96BQ3 446 aaPredicted RBP21.12■□□□□ 0.97
CCDC12-208ENST00000603885 TOX2Q96NM4 488 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 JMJD4Q9H9V9 463 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 VAT1LQ9HCJ6 419 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 RBM8AQ9Y5S9 174 aaKnown RBP21.12■□□□□ 0.97
CCDC12-208ENST00000603885 TAF6LQ9Y6J9 622 aa21.12■□□□□ 0.97
CCDC12-208ENST00000603885 MROH7Q68CQ1 1323 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 DCDC2CA8MYV0 355 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 B4DLN1 442 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 KLRF2D3W0D1 207 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 MRPL12P52815 198 aaKnown RBP21.11■□□□□ 0.97
CCDC12-208ENST00000603885 BEX3Q00994 111 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 PDE4DQ08499 809 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 FSCN1Q16658 493 aaKnown RBP21.11■□□□□ 0.97
CCDC12-208ENST00000603885 STOX1Q6ZVD7 989 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 FBXO11Q86XK2 927 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 STAG2Q8N3U4 1231 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 LRCH3Q96II8 777 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 Q9Y3F1 56 aa21.11■□□□□ 0.97
CCDC12-208ENST00000603885 MYH6P13533 1939 aa21.1■□□□□ 0.97
CCDC12-208ENST00000603885 A0A0U1RQG5 324 aaPredicted RBP21.1■□□□□ 0.97
CCDC12-208ENST00000603885 DYNC1LI2O43237 492 aaPredicted RBP21.1■□□□□ 0.97
CCDC12-208ENST00000603885 WTAPQ15007 396 aa21.1■□□□□ 0.97
CCDC12-208ENST00000603885 MCF2L2Q86YR7 1114 aa21.1■□□□□ 0.97
CCDC12-208ENST00000603885 BADQ92934 168 aa21.1■□□□□ 0.97
CCDC12-208ENST00000603885 MAD2L2Q9UI95 211 aa21.1■□□□□ 0.97
CCDC12-208ENST00000603885 MRPL11Q9Y3B7 192 aaKnown RBP21.1■□□□□ 0.97
CCDC12-208ENST00000603885 KIAA0355O15063 1070 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 ZEB2O60315 1214 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 EDNRBP24530 442 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 DUSP28Q4G0W2 176 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 BMP2KLQ5H9B9 411 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 ESYT1Q9BSJ8 1104 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 WDR11Q9BZH6 1224 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 TMEM39AQ9NV64 488 aa21.09■□□□□ 0.97
CCDC12-208ENST00000603885 PALM3A6NDB9 673 aaPredicted RBP21.08■□□□□ 0.97
CCDC12-208ENST00000603885 ARVCFO00192 962 aa21.08■□□□□ 0.97
CCDC12-208ENST00000603885 CABYRO75952 493 aa21.08■□□□□ 0.97
CCDC12-208ENST00000603885 FAAP100Q0VG06 881 aa21.08■□□□□ 0.97
CCDC12-208ENST00000603885 GRM4Q14833 912 aa21.08■□□□□ 0.97
CCDC12-208ENST00000603885 TMEM67Q5HYA8 995 aa21.08■□□□□ 0.97
CCDC12-208ENST00000603885 CHST3Q7LGC8 479 aa21.08■□□□□ 0.97
CCDC12-208ENST00000603885 MB21D2Q8IYB1 491 aaPredicted RBP21.08■□□□□ 0.97
CCDC12-208ENST00000603885 AMNQ9BXJ7 453 aa21.08■□□□□ 0.97
CCDC12-208ENST00000603885 LSG1Q9H089 658 aaKnown RBP21.08■□□□□ 0.97
CCDC12-208ENST00000603885 RBM47A0AV96 593 aaKnown RBP21.07■□□□□ 0.96
CCDC12-208ENST00000603885 RAG1P15918 1043 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 PTGS1P23219 599 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 CDK7P50613 346 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 TMEM63BQ5T3F8 832 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 GPR153Q6NV75 609 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 CXCL17Q6UXB2 119 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 SYTL5Q8TDW5 730 aaPredicted RBP21.07■□□□□ 0.96
CCDC12-208ENST00000603885 TBC1D5Q92609 795 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 SENP2Q9HC62 589 aa21.07■□□□□ 0.96
CCDC12-208ENST00000603885 ZBTB5O15062 677 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 ANTXR2P58335 489 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 PPP2R5BQ15173 497 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 CATIPQ7Z7H3 387 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 SKAP1Q86WV1 359 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 SCFD2Q8WU76 684 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 MTMR8Q96EF0 704 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 ANO2Q9NQ90 1003 aa21.06■□□□□ 0.96
CCDC12-208ENST00000603885 NKRFO15226 690 aaKnown RBP eCLIP21.05■□□□□ 0.96
CCDC12-208ENST00000603885 TLR3O15455 904 aaKnown RBP21.05■□□□□ 0.96
CCDC12-208ENST00000603885 ITGB8P26012 769 aa21.05■□□□□ 0.96
CCDC12-208ENST00000603885 TROAPQ12815 778 aa21.05■□□□□ 0.96
CCDC12-208ENST00000603885 TRAF1Q13077 416 aa21.05■□□□□ 0.96
CCDC12-208ENST00000603885 CASC1Q6TDU7 716 aa21.05■□□□□ 0.96
CCDC12-208ENST00000603885 IGDCC4Q8TDY8 1250 aa21.05■□□□□ 0.96
CCDC12-208ENST00000603885 NSUN6Q8TEA1 469 aaKnown RBP21.05■□□□□ 0.96
CCDC12-208ENST00000603885 LAMA2P24043 3122 aaKnown RBP21.05■□□□□ 0.96
CCDC12-208ENST00000603885 CPT1AP50416 773 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 HOMER1Q86YM7 354 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 FAM126BQ8IXS8 530 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 OR6J1Q8NGC5 347 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 TAAR1Q96RJ0 339 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 IWS1Q96ST2 819 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 RMDN3Q96TC7 470 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 MTA3Q9BTC8 594 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 SEZ6LQ9BYH1 1024 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 RIOX1Q9H6W3 641 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 COL20A1Q9P218 1284 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 TBX21Q9UL17 535 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 PCDHA1Q9Y5I3 950 aa21.04■□□□□ 0.96
CCDC12-208ENST00000603885 SLC27A2O14975 620 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 PRC1O43663 620 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 PPP1R11O60927 126 aaPredicted RBP21.03■□□□□ 0.96
CCDC12-208ENST00000603885 CFBP00751 764 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 MCM5P33992 734 aa21.03■□□□□ 0.96
CCDC12-208ENST00000603885 FPGSQ05932 587 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms