RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 ERMNQ8TAM6 284 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 MBD2Q9UBB5 411 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 NOC2LQ9Y3T9 749 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 TOPBP1Q92547 1522 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 ABCA9Q8IUA7 1624 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TBC1D8O95759 1140 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 LAMC2Q13753 1193 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 EPSTI1Q96J88 318 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 IFIH1Q9BYX4 1025 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 SBNO2Q9Y2G9 1366 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 CALUO43852 315 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 PDE1AP54750 535 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 MDM2Q00987 491 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 TBC1D10BQ4KMP7 808 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 LRRC8EQ6NSJ5 796 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 DSEQ9UL01 958 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PALM3A6NDB9 673 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 RAB25P57735 213 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 MYL5Q02045 173 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 LRRC63Q05C16 580 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TJAP1Q5JTD0 557 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 NBPF5PQ86XG9 351 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 INTS13Q9NVM9 706 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 AXIN1O15169 862 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 VPS37BQ9H9H4 285 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 AHCYL1O43865 530 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 ACCSLQ4AC99 568 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 HAUS3Q68CZ6 603 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 EFCAB1Q9HAE3 211 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 GRID1Q9ULK0 1009 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TCP11X1B4DZS4 312 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 ITGADQ13349 1161 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TMPRSS6Q8IU80 811 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PHKBQ93100 1093 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PLGRKTQ9HBL7 147 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 FAM107AO95990 144 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 STX2P32856 288 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PDE1BQ01064 536 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 KIF23Q02241 960 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 RBL2Q08999 1139 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 KLHL30Q0D2K2 578 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TMEM67Q5HYA8 995 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TRMT2AQ8IZ69 625 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 LRRC8CQ8TDW0 803 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 UBP1Q9NZI7 540 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 LRRIQ1Q96JM4 1722 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 KPNA4O00629 521 aaPredicted RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 KRT10P13645 584 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 TAF11Q15544 211 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 KRT39Q6A163 491 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 LARP6Q9BRS8 491 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 EHMT1Q9H9B1 1298 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 LAD1O00515 517 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 GIPC1O14908 333 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 CYTH3O43739 400 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 PM20D2Q8IYS1 436 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 OPTNQ96CV9 577 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 MRPL46Q9H2W6 279 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 KRT15P19012 456 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 MTRQ99707 1265 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 FAM129AQ9BZQ8 928 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 PAIP1Q9H074 479 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 ABCB6Q9NP58 842 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 ATG3Q9NT62 314 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 SAMD9LQ8IVG5 1584 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 CCDC194A0A1B0GVG4 234 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 VCAM1P19320 739 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 EEF1DP29692 281 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 SLC1A1P43005 524 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 DIS3LQ8TF46 1054 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 ESR2Q92731 530 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 CLMNQ96JQ2 1002 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 RNF123Q5XPI4 1314 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 SLCO1B7G3V0H7 640 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 IFIT1P09914 478 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 LMOD1P29536 600 aaPredicted RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 SNX17Q15036 470 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 FOXP4Q8IVH2 680 aaPredicted RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 BEST2Q8NFU1 509 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 CEP95Q96GE4 821 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 U2AF2P26368 475 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEB-218ENST00000603639 GPC5P78333 572 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 PRPSAP1Q14558 356 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 LRIG3Q6UXM1 1119 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 MOV10Q9HCE1 1003 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 CNNM1Q9NRU3 951 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 NRBP2Q9NSY0 501 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 SRRM3A6NNA2 597 aaPredicted RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 GGPS1O95749 300 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 MARK3P27448 753 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 RAP1GAPP47736 663 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 PPIL2Q13356 520 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 RIPK1Q13546 671 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 CRLF3Q8IUI8 442 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 CCDC33Q8N5R6 958 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 RSAD2Q8WXG1 361 aa3.68□□□□□ -1.82
NEB-218ENST00000603639 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEB-218ENST00000603639 ATP5BP06576 529 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 ADARP55265 1226 aaKnown RBP3.68□□□□□ -1.82
NEB-218ENST00000603639 DEFA1P59665 94 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms