RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 BLOC1S6Q9UL45 172 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 MKL2Q9ULH7 1088 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 RGPD1P0DJD0 1748 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 LRPPRCP42704 1394 aaKnown RBP5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 SGSM2O43147 1006 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 AHCYL1O43865 530 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 MMEP08473 750 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 GNA15P30679 374 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 ATP6V1E1P36543 226 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 MCM2P49736 904 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 POLR2FP61218 127 aaKnown RBP5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 MRPS35P82673 323 aaKnown RBP5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 MLLT1Q03111 559 aaPredicted RBP5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 COL9A2Q14055 689 aaPredicted RBP5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 TBC1D25Q3MII6 688 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 PLA2G4EQ3MJ16 856 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 TM4SF20Q53R12 229 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 C10orf76Q5T2E6 689 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 SLC6A19Q695T7 634 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 LEKR1Q6ZMV7 388 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 GPT2Q8TD30 523 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 ASIC4Q96FT7 647 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 FAM81BQ96LP2 452 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 ZFYVE28Q9HCC9 887 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 ANLNQ9NQW6 1124 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 TMOD4Q9NZQ9 345 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
SPTBN1-206ENST00000602898 SERTM1A2A2V5 107 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 ALG1L2C9J202 215 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 CDKL5O76039 1030 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 MAP3K6O95382 1288 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 SLC3A2P08195 630 aaKnown RBP5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 CHKAP35790 457 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 RPS6KA3P51812 740 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 PLCB3Q01970 1234 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 USPL1Q5W0Q7 1092 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 CCDC186Q7Z3E2 898 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 ATCAYQ86WG3 371 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 DCLK2Q8N568 766 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 ABTB2Q8N961 1025 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 RBM18Q96H35 190 aaKnown RBP5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 CRB3Q9BUF7 120 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 IQCGQ9H095 443 aaKnown RBP5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 DDX21Q9NR30 783 aaKnown RBP eCLIP5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 TMPRSS4Q9NRS4 437 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 KBTBD4Q9NVX7 518 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 TRAK1Q9UPV9 953 aa5.65□□□□□ -1.51
SPTBN1-206ENST00000602898 MUSKO15146 869 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 SGTAO43765 313 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TMCC2O75069 709 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 HNRNPCP07910 306 aaKnown RBP eCLIP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 PARP1P09874 1014 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 ALAS1P13196 640 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 HOXD10P28358 340 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 ALDH1B1P30837 517 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 COX10Q12887 443 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 FOXC1Q12948 553 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 GRIK3Q13003 919 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 RBBP5Q15291 538 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 SAFBQ15424 915 aaKnown RBP eCLIP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 RRP12Q5JTH9 1297 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TRIM68Q6AZZ1 485 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 MZT2BQ6NZ67 158 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 DSTYKQ6XUX3 929 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 NFXL1Q6ZNB6 911 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 CCDC191Q8NCU4 936 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 ZNF397Q8NF99 534 aaPredicted RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 PPP1R14CQ8TAE6 165 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 C17orf50Q8WW18 174 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 SEL1LQ9UBV2 794 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 STAP2Q9UGK3 403 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 MCM8Q9UJA3 840 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 C2CD2Q9Y426 696 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 CCDC18Q5T9S5 1454 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TMCO5BA8MYB1 307 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 NEBLO76041 1014 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 USP8P40818 1118 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TBC1D8BQ0IIM8 1120 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TMED1Q13445 227 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 SMAD4Q13485 552 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 PDIA5Q14554 519 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TMCO3Q6UWJ1 677 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 ZBTB46Q86UZ6 589 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 TMEM151BQ8IW70 566 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 NIM1KQ8IY84 436 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 GOLGA5Q8TBA6 731 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 THOC1Q96FV9 657 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 SPATS2LQ9NUQ6 558 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 LCMT1Q9UIC8 334 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 CDC42BPAQ5VT25 1732 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 FAM177BA6PVY3 158 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 NDUFB5O43674 189 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 DKK1O94907 266 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 NUCB2P80303 420 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 PURAQ00577 322 aaKnown RBP5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 GPS2Q13227 327 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 MYBPC3Q14896 1274 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 KLHL40Q2TBA0 621 aa5.64□□□□□ -1.51
SPTBN1-206ENST00000602898 VPS53Q5VIR6 699 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms