RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 CYP46A1Q9Y6A2 500 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 TNRC18O15417 2968 aaPredicted RBP14.84□□□□□ -0.03
USE1-209ENST00000601592 PNMA6FA0A0J9YX94 578 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 ZNF865P0CJ78 1059 aaPredicted RBP14.83□□□□□ -0.04
USE1-209ENST00000601592 AKR1A1P14550 325 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 ALDH5A1P51649 535 aaPredicted RBP14.83□□□□□ -0.04
USE1-209ENST00000601592 TRAF1Q13077 416 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 ACVR2BQ13705 512 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 RUFY3Q7L099 469 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 EEPD1Q7L9B9 569 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 SRBD1Q8N5C6 995 aaKnown RBP14.83□□□□□ -0.04
USE1-209ENST00000601592 TBC1D5Q92609 795 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 PAWRQ96IZ0 340 aaKnown RBP14.83□□□□□ -0.04
USE1-209ENST00000601592 ABHD16BQ9H3Z7 469 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
USE1-209ENST00000601592 ALPK3Q96L96 1907 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 ASTN1O14525 1302 aa14.83□□□□□ -0.04
USE1-209ENST00000601592 KIAA1217Q5T5P2 1943 aa14.82□□□□□ -0.04
USE1-209ENST00000601592 hCG_1642624A0A1W2PR95 340 aa14.82□□□□□ -0.04
USE1-209ENST00000601592 RARBP10826 455 aa14.82□□□□□ -0.04
USE1-209ENST00000601592 METAP2P50579 478 aaKnown RBP eCLIP14.82□□□□□ -0.04
USE1-209ENST00000601592 NOL8Q76FK4 1167 aaKnown RBP14.82□□□□□ -0.04
USE1-209ENST00000601592 NECAB2Q7Z6G3 386 aa14.82□□□□□ -0.04
USE1-209ENST00000601592 ANKLE1Q8NAG6 615 aa14.82□□□□□ -0.04
USE1-209ENST00000601592 LENG1Q96BZ8 264 aaPredicted RBP14.82□□□□□ -0.04
USE1-209ENST00000601592 MPHOSPH6Q99547 160 aaKnown RBP14.82□□□□□ -0.04
USE1-209ENST00000601592 MKI67P46013 3256 aaKnown RBP14.81□□□□□ -0.04
USE1-209ENST00000601592 CAPN2P17655 700 aa14.81□□□□□ -0.04
USE1-209ENST00000601592 PDE4DQ08499 809 aa14.81□□□□□ -0.04
USE1-209ENST00000601592 CCDC144BQ3MJ40 725 aa14.81□□□□□ -0.04
USE1-209ENST00000601592 FBXO16Q8IX29 292 aaPredicted RBP14.81□□□□□ -0.04
USE1-209ENST00000601592 ZSWIM6Q9HCJ5 1215 aa14.81□□□□□ -0.04
USE1-209ENST00000601592 XPNPEP3Q9NQH7 507 aa14.81□□□□□ -0.04
USE1-209ENST00000601592 FAM184BQ9ULE4 1060 aa14.81□□□□□ -0.04
USE1-209ENST00000601592 SEC24BO95487 1268 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 SMARCA1P28370 1054 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 HOXA13P31271 388 aaPredicted RBP14.8□□□□□ -0.04
USE1-209ENST00000601592 GJC2Q5T442 439 aaPredicted RBP14.8□□□□□ -0.04
USE1-209ENST00000601592 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 SYTL5Q8TDW5 730 aaPredicted RBP14.8□□□□□ -0.04
USE1-209ENST00000601592 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
USE1-209ENST00000601592 TM6SF1Q9BZW5 370 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 C11orf49Q9H6J7 331 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 PDRG1Q9NUG6 133 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 CNTNAP5Q8WYK1 1306 aa14.8□□□□□ -0.04
USE1-209ENST00000601592 B4DLN1 442 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 KBTBD13C9JR72 458 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 GCOM1H8Y6P7 765 aaPredicted RBP14.79□□□□□ -0.04
USE1-209ENST00000601592 OPLAHO14841 1288 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 PGK1P00558 417 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 POLR2MP0CAP2 368 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 CDC27P30260 824 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 MRPL12P52815 198 aaKnown RBP14.79□□□□□ -0.04
USE1-209ENST00000601592 C8orf34Q49A92 452 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 ARHGEF16Q5VV41 709 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 HEATR3Q7Z4Q2 680 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 UBE2Q1Q7Z7E8 422 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 FCHSD1Q86WN1 690 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 ARRDC4Q8NCT1 418 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 DNERQ8NFT8 737 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 DPF3Q92784 378 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 TAAR1Q96RJ0 339 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 RMDN3Q96TC7 470 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 HTATIP2Q9BUP3 242 aa14.79□□□□□ -0.04
USE1-209ENST00000601592 MYH7BA7E2Y1 1941 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 CCDC196A0A1B0GTZ2 297 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 DNM1LO00429 736 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 EIF2AK2P19525 551 aaKnown RBP14.78□□□□□ -0.04
USE1-209ENST00000601592 ADCYAP1R1P41586 468 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
USE1-209ENST00000601592 HSD17B4P51659 736 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 RCAN1P53805 252 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 ANAPC15P60006 121 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 CCT2P78371 535 aaKnown RBP14.78□□□□□ -0.04
USE1-209ENST00000601592 TNFAIP2Q03169 654 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 TOB2Q14106 344 aaPredicted RBP14.78□□□□□ -0.04
USE1-209ENST00000601592 NSUN6Q8TEA1 469 aaKnown RBP14.78□□□□□ -0.04
USE1-209ENST00000601592 GPKOWQ92917 476 aaPredicted RBP eCLIP14.78□□□□□ -0.04
USE1-209ENST00000601592 CUL5Q93034 780 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 AGXT2Q9BYV1 514 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 KATNBL1Q9H079 304 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 VTA1Q9NP79 307 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 PDGFCQ9NRA1 345 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 GTF3C3Q9Y5Q9 886 aa14.78□□□□□ -0.04
USE1-209ENST00000601592 SYNRGQ9UMZ2 1314 aa14.77□□□□□ -0.04
USE1-209ENST00000601592 LOC102724159A0A0B4J2E5 919 aa14.77□□□□□ -0.05
USE1-209ENST00000601592 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.77□□□□□ -0.05
USE1-209ENST00000601592 ADCY6O43306 1168 aa14.77□□□□□ -0.05
USE1-209ENST00000601592 C6orf222P0C671 652 aaPredicted RBP14.77□□□□□ -0.05
USE1-209ENST00000601592 ADD1P35611 737 aaKnown RBP14.77□□□□□ -0.05
USE1-209ENST00000601592 PWP2Q15269 919 aaKnown RBP14.77□□□□□ -0.05
USE1-209ENST00000601592 LRRC41Q15345 812 aa14.77□□□□□ -0.05
USE1-209ENST00000601592 RNF180Q86T96 592 aa14.77□□□□□ -0.05
USE1-209ENST00000601592 FBXL16Q8N461 479 aa14.77□□□□□ -0.05
USE1-209ENST00000601592 SENP6Q9GZR1 1112 aaPredicted RBP14.77□□□□□ -0.05
USE1-209ENST00000601592 MAF1Q9H063 256 aa14.77□□□□□ -0.05
USE1-209ENST00000601592 SPC25Q9HBM1 224 aa14.77□□□□□ -0.05
USE1-209ENST00000601592 FAM217BQ9NTX9 383 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms