RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 TCP11L2Q8N4U5 519 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 PMFBP1Q8TBY8 1022 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 DNAJC2Q99543 621 aaKnown RBP6.38□□□□□ -1.39
VRK3-222ENST00000601324 PRDM11Q9NQV5 511 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 SUCOQ9UBS9 1254 aaKnown RBP6.38□□□□□ -1.39
VRK3-222ENST00000601324 ZNF214Q9UL59 606 aaPredicted RBP6.38□□□□□ -1.39
VRK3-222ENST00000601324 LTBP3Q9NS15 1303 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 ADCY9O60503 1353 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 DHX57Q6P158 1386 aaKnown RBP6.38□□□□□ -1.39
VRK3-222ENST00000601324 PAPPAQ13219 1627 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 OVOS2A0A0G2JMS6 1433 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 OVOS2A0A0J9YW53 1432 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 OVOS2Q6IE36 1432 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 CPDO75976 1380 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 CNTNAP4Q9C0A0 1308 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 RAB33AQ14088 237 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 SLC15A2Q16348 729 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 FXNQ16595 210 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 BBS9Q3SYG4 887 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 NBPF12Q5TAG4 269 aaPredicted RBP6.37□□□□□ -1.39
VRK3-222ENST00000601324 VWCEQ96DN2 955 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 FBXL18Q96ME1 805 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 TRIM55Q9BYV6 548 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 MKNK2Q9HBH9 465 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 PIM2Q9P1W9 311 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 LEMD3Q9Y2U8 911 aa6.37□□□□□ -1.39
VRK3-222ENST00000601324 THRAP3Q9Y2W1 955 aaKnown RBP6.37□□□□□ -1.39
VRK3-222ENST00000601324 PHRF1Q9P1Y6 1649 aaKnown RBP6.36□□□□□ -1.39
VRK3-222ENST00000601324 PRR19A6NJB7 356 aa6.36□□□□□ -1.39
VRK3-222ENST00000601324 GNAT3A8MTJ3 354 aa6.36□□□□□ -1.39
VRK3-222ENST00000601324 ZNF865P0CJ78 1059 aaPredicted RBP6.36□□□□□ -1.39
VRK3-222ENST00000601324 KIR3DL1P43629 444 aa6.36□□□□□ -1.39
VRK3-222ENST00000601324 LARP1BQ659C4 914 aaKnown RBP6.36□□□□□ -1.39
VRK3-222ENST00000601324 PPFIBP1Q86W92 1011 aa6.36□□□□□ -1.39
VRK3-222ENST00000601324 SMARCC1Q92922 1105 aaPredicted RBP6.36□□□□□ -1.39
VRK3-222ENST00000601324 C14orf93Q9H972 538 aaKnown RBP6.36□□□□□ -1.39
VRK3-222ENST00000601324 LRRC4CQ9HCJ2 640 aa6.36□□□□□ -1.39
VRK3-222ENST00000601324 LRRC37A3O60309 1634 aa6.36□□□□□ -1.39
VRK3-222ENST00000601324 ATP10DQ9P241 1426 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 ANKRD30BQ9BXX2 1392 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 LOC105371045A0A1W2PR82 267 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 K7ELQ4 463 aaPredicted RBP6.35□□□□□ -1.39
VRK3-222ENST00000601324 U2SURPO15042 1029 aaKnown RBP6.35□□□□□ -1.39
VRK3-222ENST00000601324 CYP26A1O43174 497 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 IGSF3O75054 1194 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 CBX7O95931 251 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 FOSL1P15407 271 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 YBX3P16989 372 aaKnown RBP eCLIP6.35□□□□□ -1.395e-7■■□□□ 11.5
VRK3-222ENST00000601324 OXCT1P55809 520 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 SLC7A5Q01650 507 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 NCAPHQ15003 741 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 TXNRD1Q16881 649 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 ARHGAP27Q6ZUM4 889 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 MFSD4AQ8N468 514 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 ZNF512BQ96KM6 892 aaPredicted RBP6.35□□□□□ -1.39
VRK3-222ENST00000601324 MKRN2Q9H000 416 aaKnown RBP6.35□□□□□ -1.39
VRK3-222ENST00000601324 PCDHB10Q9UN67 800 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 U3KQE9 123 aa6.35□□□□□ -1.39
VRK3-222ENST00000601324 COL5A2P05997 1499 aaPredicted RBP6.34□□□□□ -1.39
VRK3-222ENST00000601324 GPRASP1Q5JY77 1395 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 USP19O94966 1318 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 PRR33A8MZF0 331 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 C9IYK1 514 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 TGFB1P01137 390 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 SERINC3Q13530 473 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 DDR2Q16832 855 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 GNPTABQ3T906 1256 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 TDRD10Q5VZ19 366 aaKnown RBP6.34□□□□□ -1.39
VRK3-222ENST00000601324 VHLLQ6RSH7 139 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 C6orf15Q6UXA7 325 aaPredicted RBP6.34□□□□□ -1.39
VRK3-222ENST00000601324 FAM178BQ8IXR5 827 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 MARCH10Q8NA82 808 aaPredicted RBP6.34□□□□□ -1.39
VRK3-222ENST00000601324 NLGN2Q8NFZ4 835 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 KLHL6Q8WZ60 621 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 PRAM1Q96QH2 718 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 SIRPGQ9P1W8 387 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 KCNH3Q9ULD8 1083 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 CAPN6Q9Y6Q1 641 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 TULP4Q9NRJ4 1543 aa6.34□□□□□ -1.39
VRK3-222ENST00000601324 ADGRB1O14514 1584 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 DDAH1O94760 285 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 CEACAM5P06731 702 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 ITIH2P19823 946 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 ITGB7P26010 798 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 PRELPP51888 382 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 GPR162Q16538 588 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 ZNF827Q17R98 1081 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 NBPF9Q3BBW0 867 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 AXDND1Q5T1B0 1012 aaPredicted RBP6.33□□□□□ -1.4
VRK3-222ENST00000601324 KIAA1211LQ6NV74 962 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 CCDC144CPQ8IYA2 1237 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 DTWD2Q8NBA8 298 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 PIWIL2Q8TC59 973 aaKnown RBP6.33□□□□□ -1.4
VRK3-222ENST00000601324 MICAL1Q8TDZ2 1067 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 Q96M66 194 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 STK32BQ9NY57 414 aa6.33□□□□□ -1.4
VRK3-222ENST00000601324 FAM155AB1AL88 458 aaPredicted RBP6.32□□□□□ -1.4
VRK3-222ENST00000601324 LRRN2O75325 713 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms