RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 REXO1Q8N1G1 1221 aaKnown RBP23.45■■□□□ 1.34
PNKP-215ENST00000600910 RASGRP4Q8TDF6 673 aa23.45■■□□□ 1.34
PNKP-215ENST00000600910 A1CFQ9NQ94 594 aaKnown RBP23.45■■□□□ 1.34
PNKP-215ENST00000600910 SAGE1Q9NXZ1 904 aa23.45■■□□□ 1.34
PNKP-215ENST00000600910 BIN2Q9UBW5 565 aaPredicted RBP23.45■■□□□ 1.34
PNKP-215ENST00000600910 M0R2N6 131 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 PIK3CDO00329 1044 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 CLK2P49760 499 aaKnown RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 RPS6P62753 249 aaKnown RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 GHRHRQ02643 423 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 SLC30A10Q6XR72 485 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 ANKRD35Q8N283 1001 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 TMEM260Q9NX78 707 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 PCDHA6Q9UN73 950 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 PCDHA8Q9Y5H6 950 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 KIF28PB7ZC32 967 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 ECM2O94769 699 aaPredicted RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 MAPK4P31152 587 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 GNL2Q13823 731 aaKnown RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 BAATQ14032 418 aaPredicted RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 FOXD4L5Q5VV16 416 aaPredicted RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.44■■□□□ 1.34
PNKP-215ENST00000600910 FERMT3Q86UX7 667 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 FOXD4L4Q8WXT5 416 aaPredicted RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 BEGAINQ9BUH8 593 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 FOXP1Q9H334 677 aaPredicted RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 MAP3K20Q9NYL2 800 aaKnown RBP23.44■■□□□ 1.34
PNKP-215ENST00000600910 CYP39A1Q9NYL5 469 aa23.44■■□□□ 1.34
PNKP-215ENST00000600910 ZSCAN22P10073 491 aaPredicted RBP23.43■■□□□ 1.34
PNKP-215ENST00000600910 JAKMIP3Q5VZ66 844 aa23.43■■□□□ 1.34
PNKP-215ENST00000600910 GPR142Q7Z601 462 aa23.43■■□□□ 1.34
PNKP-215ENST00000600910 TEX2Q8IWB9 1127 aa23.43■■□□□ 1.34
PNKP-215ENST00000600910 SAMD3Q8N6K7 520 aa23.43■■□□□ 1.34
PNKP-215ENST00000600910 MMP19Q99542 508 aa23.43■■□□□ 1.34
PNKP-215ENST00000600910 CIZ1Q9ULV3 898 aaPredicted RBP23.43■■□□□ 1.34
PNKP-215ENST00000600910 BRD1O95696 1058 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 FCER1AP12319 257 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 U2AF2P26368 475 aaKnown RBP eCLIP23.42■■□□□ 1.344e-8■□□□□ 9.6
PNKP-215ENST00000600910 KCTD2Q14681 263 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 FCHSD1Q86WN1 690 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 TNFRSF25Q93038 417 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 MAF1Q9H063 256 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 ZDHHC9Q9Y397 364 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 PFASO15067 1338 aa23.42■■□□□ 1.34
PNKP-215ENST00000600910 NUCB2P80303 420 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 PLEKHH3Q7Z736 793 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 SYTL5Q8TDW5 730 aaPredicted RBP23.41■■□□□ 1.34
PNKP-215ENST00000600910 PGBD1Q96JS3 809 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 COL20A1Q9P218 1284 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 IVNS1ABPQ9Y6Y0 642 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 PLXNB2O15031 1838 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 LACTBP83111 547 aaPredicted RBP23.41■■□□□ 1.34
PNKP-215ENST00000600910 SP3Q02447 781 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 AP3B2Q13367 1082 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 NOM1Q5C9Z4 860 aaKnown RBP23.41■■□□□ 1.34
PNKP-215ENST00000600910 NOSTRINQ8IVI9 506 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 WBP1LQ9NX94 342 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 CHMP5Q9NZZ3 219 aa23.41■■□□□ 1.34
PNKP-215ENST00000600910 SPDYE3A6NKU9 549 aa23.4■■□□□ 1.34
PNKP-215ENST00000600910 STRNO43815 780 aa23.4■■□□□ 1.34
PNKP-215ENST00000600910 PTPREP23469 700 aa23.4■■□□□ 1.34
PNKP-215ENST00000600910 RESTQ13127 1097 aa23.4■■□□□ 1.34
PNKP-215ENST00000600910 EARS2Q5JPH6 523 aaKnown RBP23.4■■□□□ 1.34
PNKP-215ENST00000600910 PIK3AP1Q6ZUJ8 805 aa23.4■■□□□ 1.34
PNKP-215ENST00000600910 PURBQ96QR8 312 aaKnown RBP23.4■■□□□ 1.34
PNKP-215ENST00000600910 CCDC194A0A1B0GVG4 234 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 GPR25O00155 361 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 F13A1P00488 732 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 FOSP01100 380 aaPredicted RBP23.39■■□□□ 1.33
PNKP-215ENST00000600910 CTGFP29279 349 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 MCTP2Q6DN12 878 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 KRT25Q7Z3Z0 450 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 ABRAQ8N0Z2 381 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 TSKSQ9UJT2 592 aa23.39■■□□□ 1.33
PNKP-215ENST00000600910 FAM205CA6NFA0 338 aa23.38■■□□□ 1.33
PNKP-215ENST00000600910 PGK2P07205 417 aa23.38■■□□□ 1.33
PNKP-215ENST00000600910 ADORA2AP29274 412 aa23.38■■□□□ 1.33
PNKP-215ENST00000600910 GRB14Q14449 540 aa23.38■■□□□ 1.33
PNKP-215ENST00000600910 TAAR1Q96RJ0 339 aa23.38■■□□□ 1.33
PNKP-215ENST00000600910 ANO3Q9BYT9 981 aa23.38■■□□□ 1.33
PNKP-215ENST00000600910 ARHGAP39Q9C0H5 1083 aa23.38■■□□□ 1.33
PNKP-215ENST00000600910 POTEB2H3BUK9 544 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 TNPO2O14787 897 aaKnown RBP23.37■■□□□ 1.33
PNKP-215ENST00000600910 PSMC4P43686 418 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 CNTN2Q02246 1040 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 ZSCAN16Q9H4T2 348 aaPredicted RBP23.37■■□□□ 1.33
PNKP-215ENST00000600910 LCTP09848 1927 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 MGAMO43451 1857 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 ZSWIM8A7E2V4 1837 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 DNAJC25-GNG10A0A024R161 153 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 FCGRTP55899 365 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 KIF22Q14807 665 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 NONOQ15233 471 aaKnown RBP eCLIP23.37■■□□□ 1.33
PNKP-215ENST00000600910 BRAPQ7Z569 592 aa23.37■■□□□ 1.33
PNKP-215ENST00000600910 ZNFX1Q9P2E3 1918 aaKnown RBP23.36■■□□□ 1.33
PNKP-215ENST00000600910 SLC15A5A6NIM6 579 aa23.36■■□□□ 1.33
PNKP-215ENST00000600910 INF2Q27J81 1249 aa23.36■■□□□ 1.33
PNKP-215ENST00000600910 FAM133AQ8N9E0 248 aa23.36■■□□□ 1.33
PNKP-215ENST00000600910 TBCKQ8TEA7 893 aa23.36■■□□□ 1.33
PNKP-215ENST00000600910 TRIM47Q96LD4 638 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms