RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 NR2E3Q9Y5X4 410 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 EVI5O60447 810 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 DUSP11O75319 330 aaKnown RBP10.22□□□□□ -0.77
SSBP4-208ENST00000600628 AKR1A1P14550 325 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 ALDH5A1P51649 535 aaPredicted RBP10.22□□□□□ -0.77
SSBP4-208ENST00000600628 LRRC41Q15345 812 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 CCDC144BQ3MJ40 725 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 NSMFQ6X4W1 530 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 FBXO11Q86XK2 927 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 SRBD1Q8N5C6 995 aaKnown RBP10.22□□□□□ -0.77
SSBP4-208ENST00000600628 FANCBQ8NB91 859 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 MYL10Q9BUA6 226 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 LRRC2Q9BYS8 371 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 TM6SF1Q9BZW5 370 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 BRPF3Q9ULD4 1205 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 CNPY2Q9Y2B0 182 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 DDX49Q9Y6V7 483 aaKnown RBP10.22□□□□□ -0.77
SSBP4-208ENST00000600628 FRMPD4Q14CM0 1322 aa10.22□□□□□ -0.77
SSBP4-208ENST00000600628 SCN10AQ9Y5Y9 1956 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 CALM1P0DP23 149 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 CALM2P0DP24 149 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 CALM3P0DP25 149 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 KIF5BP33176 963 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 GJA9P57773 515 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 RNF207Q6ZRF8 634 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 ARRDC4Q8NCT1 418 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 SYTL5Q8TDW5 730 aaPredicted RBP10.21□□□□□ -0.77
SSBP4-208ENST00000600628 PIGSQ96S52 555 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 LZTS2Q9BRK4 669 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 TSEN34Q9BSV6 310 aaKnown RBP10.21□□□□□ -0.77
SSBP4-208ENST00000600628 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 VTA1Q9NP79 307 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
SSBP4-208ENST00000600628 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 PHF24Q9UPV7 400 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 MRPL11Q9Y3B7 192 aaKnown RBP10.21□□□□□ -0.77
SSBP4-208ENST00000600628 Q9Y3F1 56 aa10.21□□□□□ -0.77
SSBP4-208ENST00000600628 SYNRGQ9UMZ2 1314 aa10.21□□□□□ -0.78
SSBP4-208ENST00000600628 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.2□□□□□ -0.78
SSBP4-208ENST00000600628 PLEKHA8P1O95397 391 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 RARBP10826 455 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 CPA1P15085 419 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 RPS6KB1P23443 525 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 GNAQP50148 359 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 LTBP2Q14767 1821 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 LRRC26Q2I0M4 334 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 USH1GQ495M9 461 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 ANO1Q5XXA6 986 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 IQSEC1Q6DN90 963 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 MCF2L2Q86YR7 1114 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 TEX2Q8IWB9 1127 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 CNTNAP5Q8WYK1 1306 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 LENG1Q96BZ8 264 aaPredicted RBP10.2□□□□□ -0.78
SSBP4-208ENST00000600628 TCEANC2Q96MN5 208 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 PCDHA1Q9Y5I3 950 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 SLC12A7Q9Y666 1083 aa10.2□□□□□ -0.78
SSBP4-208ENST00000600628 PTPDC1A2A3K4 754 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 MYADML2A6NDP7 307 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 SMPD1P17405 629 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 CDC27P30260 824 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 TRAF1Q13077 416 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 TOB2Q14106 344 aaPredicted RBP10.19□□□□□ -0.78
SSBP4-208ENST00000600628 PPP2R5BQ15173 497 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 NTRK3Q16288 839 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 DUSP28Q4G0W2 176 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 TMEM63BQ5T3F8 832 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 GJC2Q5T442 439 aaPredicted RBP10.19□□□□□ -0.78
SSBP4-208ENST00000600628 CCDC62Q6P9F0 684 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 CTCFLQ8NI51 663 aaPredicted RBP10.19□□□□□ -0.78
SSBP4-208ENST00000600628 JAKMIP1Q96N16 626 aaKnown RBP10.19□□□□□ -0.78
SSBP4-208ENST00000600628 TAAR1Q96RJ0 339 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 IWS1Q96ST2 819 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 SENP6Q9GZR1 1112 aaPredicted RBP10.19□□□□□ -0.78
SSBP4-208ENST00000600628 ALDH8A1Q9H2A2 487 aaPredicted RBP10.19□□□□□ -0.78
SSBP4-208ENST00000600628 VAT1LQ9HCJ6 419 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 XPNPEP3Q9NQH7 507 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 PDGFCQ9NRA1 345 aa10.19□□□□□ -0.78
SSBP4-208ENST00000600628 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
SSBP4-208ENST00000600628 MYH7BA7E2Y1 1941 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 MEIS2O14770 477 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 RGS20O76081 388 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 PGK1P00558 417 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 RXRAP19793 462 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 ADCYAP1R1P41586 468 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 CDK7P50613 346 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 ANAPC15P60006 121 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
SSBP4-208ENST00000600628 HABP4Q5JVS0 413 aaKnown RBP10.18□□□□□ -0.78
SSBP4-208ENST00000600628 SLC39A5Q6ZMH5 540 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 RUFY3Q7L099 469 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 FBXO16Q8IX29 292 aaPredicted RBP10.18□□□□□ -0.78
SSBP4-208ENST00000600628 C7orf61Q8IZ16 206 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 SLC43A3Q8NBI5 491 aa10.18□□□□□ -0.78
SSBP4-208ENST00000600628 NSUN6Q8TEA1 469 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms