RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 DOCK1Q14185 1865 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 CYP3A7-CYP3A51PA0A087WV96 503 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 VCAM1P19320 739 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 CYP3A7P24462 503 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 IL17AQ16552 155 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 CALCRLQ16602 461 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 EPSTI1Q96J88 318 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 MTMR9Q96QG7 549 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 BPIFA3Q9BQP9 254 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 TMEM60Q9H2L4 133 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 USP17L15C9J2P7 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L13C9JLJ4 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L11C9JVI0 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L18D6R9N7 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L22D6RA61 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L17D6RBQ6 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L19D6RCP7 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L20D6RJB6 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 PTMAP06454 111 aaKnown RBP22.67■■□□□ 1.22
PNKP-214ENST00000600573 SNAP25P60880 206 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 PLCB2Q00722 1185 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L24Q0WX57 530 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 PDIA5Q14554 519 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 TMEM266Q2M3C6 531 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 USP17L6PQ6QN14 398 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 TMOD4Q9NZQ9 345 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 PPP1R9AQ9ULJ8 1098 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 CSADQ9Y600 493 aa22.67■■□□□ 1.22
PNKP-214ENST00000600573 SSC5DA1L4H1 1573 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 ESPNB1AK53 854 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 GCOM1H8Y6P7 765 aaPredicted RBP22.66■■□□□ 1.22
PNKP-214ENST00000600573 ZBED4O75132 1171 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 POLR2MP0CAP2 368 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 UBA7P41226 1012 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 LDHDQ86WU2 507 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 MCF2L2Q86YR7 1114 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 TANGO6Q9C0B7 1094 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 MAF1Q9H063 256 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 SLC38A10Q9HBR0 1119 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 RABGAP1Q9Y3P9 1069 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 AFG3L2Q9Y4W6 797 aa22.66■■□□□ 1.22
PNKP-214ENST00000600573 CTDP1Q9Y5B0 961 aaPredicted RBP22.66■■□□□ 1.22
PNKP-214ENST00000600573 BECN2A8MW95 431 aa22.65■■□□□ 1.22
PNKP-214ENST00000600573 ACTN4O43707 911 aaKnown RBP22.65■■□□□ 1.22
PNKP-214ENST00000600573 FXR2P51116 673 aaKnown RBP eCLIP22.65■■□□□ 1.22
PNKP-214ENST00000600573 MDM2Q00987 491 aaPredicted RBP22.65■■□□□ 1.22
PNKP-214ENST00000600573 PNOCQ13519 176 aa22.65■■□□□ 1.22
PNKP-214ENST00000600573 SH3D19Q5HYK7 790 aa22.65■■□□□ 1.22
PNKP-214ENST00000600573 CCDC174Q6PII3 467 aa22.65■■□□□ 1.22
PNKP-214ENST00000600573 USP49Q70CQ1 688 aa22.65■■□□□ 1.22
PNKP-214ENST00000600573 MBOAT7Q96N66 472 aa22.65■■□□□ 1.22
PNKP-214ENST00000600573 TAF1DQ9H5J8 278 aaPredicted RBP22.65■■□□□ 1.22
PNKP-214ENST00000600573 RPAP3Q9H6T3 665 aaPredicted RBP22.65■■□□□ 1.22
PNKP-214ENST00000600573 DDX25Q9UHL0 483 aaKnown RBP22.65■■□□□ 1.22
PNKP-214ENST00000600573 SERTAD1Q9UHV2 236 aa22.65■■□□□ 1.22
PNKP-214ENST00000600573 FLOT1O75955 427 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 SMC2O95347 1197 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 CYP3A4P08684 503 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 SREBF1P36956 1147 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 POSTNQ15063 836 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 DPCR1Q3MIW9 517 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 ZSCAN30Q86W11 494 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 CUEDC2Q9H467 287 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 FBXO28Q9NVF7 368 aa22.64■■□□□ 1.22
PNKP-214ENST00000600573 TBX3O15119 743 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 AP5Z1O43299 807 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 SLC26A4O43511 780 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 CIITAP33076 1130 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 OAZ1P54368 228 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 NT5DC1Q5TFE4 455 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 TRIML1Q8N9V2 468 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 CRYGNQ8WXF5 182 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 DHX58Q96C10 678 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 MAGEF1Q9HAY2 307 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 CCPG1Q9ULG6 757 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 MYPNQ86TC9 1320 aa22.64■■□□□ 1.21
PNKP-214ENST00000600573 A0A087WWV3 80 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 UNCXA6NJT0 531 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 ADM5C9JUS6 153 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 BIN1O00499 593 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 OPLAHO14841 1288 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 EDIL3O43854 480 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 ARHGAP4P98171 946 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 GHRHRQ02643 423 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.63■■□□□ 1.21
PNKP-214ENST00000600573 SH3RF1Q7Z6J0 888 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 DHX40Q8IX18 779 aaKnown RBP22.63■■□□□ 1.21
PNKP-214ENST00000600573 SLFN12Q8IYM2 578 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 AOPEPQ8N6M6 819 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 PDILTQ8N807 584 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 IGSF22Q8N9C0 903 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 STK24Q9Y6E0 443 aa22.63■■□□□ 1.21
PNKP-214ENST00000600573 TDP2O95551 362 aa22.62■■□□□ 1.21
PNKP-214ENST00000600573 MYL1P05976 194 aa22.62■■□□□ 1.21
PNKP-214ENST00000600573 SEMA3FQ13275 785 aa22.62■■□□□ 1.21
PNKP-214ENST00000600573 Q4G0T1 1027 aa22.62■■□□□ 1.21
PNKP-214ENST00000600573 SARM1Q6SZW1 724 aa22.62■■□□□ 1.21
PNKP-214ENST00000600573 POTEDQ86YR6 584 aa22.62■■□□□ 1.21
PNKP-214ENST00000600573 ANKRD13AQ8IZ07 590 aa22.62■■□□□ 1.21
PNKP-214ENST00000600573 CDCA5Q96FF9 252 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms