RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 BICD2Q8TD16 824 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 GPKOWQ92917 476 aaPredicted RBP eCLIP19.21■□□□□ 0.67
USHBP1-210ENST00000600286 PSTPIP2Q9H939 334 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 C6orf50Q9HD87 102 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 SH3GLB2Q9NR46 395 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 FLT3LGP49771 235 aa19.2■□□□□ 0.66
USHBP1-210ENST00000600286 BAATQ14032 418 aaPredicted RBP19.2■□□□□ 0.66
USHBP1-210ENST00000600286 MORN1Q5T089 497 aa19.2■□□□□ 0.66
USHBP1-210ENST00000600286 WWC2Q6AWC2 1192 aa19.2■□□□□ 0.66
USHBP1-210ENST00000600286 CLEC4DQ8WXI8 215 aa19.2■□□□□ 0.66
USHBP1-210ENST00000600286 A1CFQ9NQ94 594 aaKnown RBP19.2■□□□□ 0.66
USHBP1-210ENST00000600286 CYP39A1Q9NYL5 469 aa19.2■□□□□ 0.66
USHBP1-210ENST00000600286 ADD3Q9UEY8 706 aaKnown RBP19.2■□□□□ 0.66
USHBP1-210ENST00000600286 SMC3Q9UQE7 1217 aa19.2■□□□□ 0.66
USHBP1-210ENST00000600286 SMCO2A6NFE2 343 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 NFIBO00712 420 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 CTDNEP1O95476 244 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 CYP2B6P20813 491 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 CALML3P27482 149 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 CTGFP29279 349 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 ADCY7P51828 1080 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 NLRP5P59047 1200 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 PRKCZQ05513 592 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 PKN1Q16512 942 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 MCTP2Q6DN12 878 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 SMARCC2Q8TAQ2 1214 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 GJD2Q9UKL4 321 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 DIS3Q9Y2L1 958 aaKnown RBP19.19■□□□□ 0.66
USHBP1-210ENST00000600286 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
USHBP1-210ENST00000600286 PARP14Q460N5 1801 aa19.18■□□□□ 0.66
USHBP1-210ENST00000600286 STXBP3O00186 592 aa19.18■□□□□ 0.66
USHBP1-210ENST00000600286 XRCC5P13010 732 aaKnown RBP19.18■□□□□ 0.66
USHBP1-210ENST00000600286 RPS6P62753 249 aaKnown RBP19.18■□□□□ 0.66
USHBP1-210ENST00000600286 IRF5Q13568 498 aa19.18■□□□□ 0.66
USHBP1-210ENST00000600286 APBA2Q99767 749 aa19.18■□□□□ 0.66
USHBP1-210ENST00000600286 EHMT1Q9H9B1 1298 aa19.18■□□□□ 0.66
USHBP1-210ENST00000600286 BRMS1Q9HCU9 246 aa19.18■□□□□ 0.66
USHBP1-210ENST00000600286 BAZ2BQ9UIF8 2168 aaKnown RBP19.17■□□□□ 0.66
USHBP1-210ENST00000600286 PGK2P07205 417 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 HOXC6P09630 235 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 TAL1P17542 331 aaPredicted RBP19.17■□□□□ 0.66
USHBP1-210ENST00000600286 GALNT17Q6IS24 598 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 RIC8AQ9NPQ8 531 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 VPS54Q9P1Q0 977 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 GABRQQ9UN88 632 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 PTPN22Q9Y2R2 807 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 MGAMO43451 1857 aa19.17■□□□□ 0.66
USHBP1-210ENST00000600286 ESYT2A0FGR8 921 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 ASB14A6NK59 587 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 SPDYE3A6NKU9 549 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 ADCY3O60266 1144 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 JAK2O60674 1132 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 FOSP01100 380 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-210ENST00000600286 CUL4AQ13619 759 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 SAFBQ15424 915 aaKnown RBP eCLIP19.16■□□□□ 0.66
USHBP1-210ENST00000600286 MFSD14CQ5VZR4 134 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 DNERQ8NFT8 737 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 USP6NLQ92738 828 aa19.16■□□□□ 0.66
USHBP1-210ENST00000600286 INTS4Q96HW7 963 aaKnown RBP19.16■□□□□ 0.66
USHBP1-210ENST00000600286 BIN2Q9UBW5 565 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-210ENST00000600286 KIAA0100Q14667 2235 aaKnown RBP19.16■□□□□ 0.66
USHBP1-210ENST00000600286 LOC102724159A0A0B4J2E5 919 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 PIK3CDO00329 1044 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 HSD17B4P51659 736 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 PWP2Q15269 919 aaKnown RBP19.15■□□□□ 0.66
USHBP1-210ENST00000600286 ZNF792Q3KQV3 632 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 ARHGEF16Q5VV41 709 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 FCHSD1Q86WN1 690 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 MSL3Q8N5Y2 521 aaKnown RBP19.15■□□□□ 0.66
USHBP1-210ENST00000600286 SLAIN1Q8ND83 568 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 SYTL5Q8TDW5 730 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-210ENST00000600286 PXYLP1Q8TE99 480 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 NSUN6Q8TEA1 469 aaKnown RBP19.15■□□□□ 0.66
USHBP1-210ENST00000600286 C8orf76Q96K31 380 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 ZMYND12Q9H0C1 365 aa19.15■□□□□ 0.66
USHBP1-210ENST00000600286 DAXXQ9UER7 740 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-210ENST00000600286 COL11A1P12107 1806 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-210ENST00000600286 DNAJC25-GNG10A0A024R161 153 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 COBLO75128 1261 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 HOXA13P31271 388 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-210ENST00000600286 ANP32AP39687 249 aaKnown RBP19.14■□□□□ 0.65
USHBP1-210ENST00000600286 CNTN2Q02246 1040 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 GHRHRQ02643 423 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 ST3GAL1Q11201 340 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 OLFML2BQ68BL8 750 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 SLC30A10Q6XR72 485 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 ZNF467Q7Z7K2 595 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-210ENST00000600286 FAM133AQ8N9E0 248 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 TBC1D5Q92609 795 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 ARMC5Q96C12 935 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 RMDN3Q96TC7 470 aa19.14■□□□□ 0.65
USHBP1-210ENST00000600286 FDPSP14324 419 aaKnown RBP19.13■□□□□ 0.65
USHBP1-210ENST00000600286 PDCP20941 246 aa19.13■□□□□ 0.65
USHBP1-210ENST00000600286 GJB2P29033 226 aa19.13■□□□□ 0.65
USHBP1-210ENST00000600286 GRK4P32298 578 aa19.13■□□□□ 0.65
USHBP1-210ENST00000600286 UBXN2AP68543 259 aa19.13■□□□□ 0.65
USHBP1-210ENST00000600286 USP17L6PQ6QN14 398 aa19.13■□□□□ 0.65
USHBP1-210ENST00000600286 REXO1Q8N1G1 1221 aaKnown RBP19.13■□□□□ 0.65
USHBP1-210ENST00000600286 MAML3Q96JK9 1138 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms