RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 LNPKQ9C0E8 428 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 GPCPD1Q9NPB8 672 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 IL23AQ9NPF7 189 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 INCENPQ9NQS7 918 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 DIAPH3Q9NSV4 1193 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 FRMPD2Q68DX3 1309 aaPredicted RBP20.49■□□□□ 0.87
HOMER3-210ENST00000599097 ZNF213O14771 459 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 KPNA6O60684 536 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 SLC16A2P36021 539 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 SNAP25P60880 206 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 TMEM240Q5SV17 173 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 TAPT1Q6NXT6 567 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 RPUSD2Q8IZ73 545 aaKnown RBP20.48■□□□□ 0.87
HOMER3-210ENST00000599097 GAS2L1Q99501 681 aaPredicted RBP20.48■□□□□ 0.87
HOMER3-210ENST00000599097 WDR11Q9BZH6 1224 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 MSRAQ9UJ68 235 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 ASTN1O14525 1302 aa20.48■□□□□ 0.87
HOMER3-210ENST00000599097 HAND2P61296 217 aa20.47■□□□□ 0.87
HOMER3-210ENST00000599097 PPP2R5BQ15173 497 aa20.47■□□□□ 0.87
HOMER3-210ENST00000599097 ZNF589Q86UQ0 364 aaPredicted RBP20.47■□□□□ 0.87
HOMER3-210ENST00000599097 SMC5Q8IY18 1101 aa20.47■□□□□ 0.87
HOMER3-210ENST00000599097 SCFD2Q8WU76 684 aa20.47■□□□□ 0.87
HOMER3-210ENST00000599097 SYMPKQ92797 1274 aaKnown RBP20.47■□□□□ 0.87
HOMER3-210ENST00000599097 ZNF576Q9H609 170 aa20.47■□□□□ 0.87
HOMER3-210ENST00000599097 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
HOMER3-210ENST00000599097 NFIBO00712 420 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 FGBP02675 491 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 PFKMP08237 780 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 SNHG28P0DPA3 235 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 SDSP20132 328 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 CALML3P27482 149 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 IRX5P78411 483 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-210ENST00000599097 RASIP1Q5U651 963 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 TTBK2Q6IQ55 1244 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 CHD1LQ86WJ1 897 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 RGS22Q8NE09 1264 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 HERVK_113Q902F9 699 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 KAT14Q9H8E8 782 aa20.46■□□□□ 0.87
HOMER3-210ENST00000599097 ZNF365Q70YC5 407 aa20.45■□□□□ 0.86
HOMER3-210ENST00000599097 RASGRP2Q7LDG7 609 aa20.45■□□□□ 0.86
HOMER3-210ENST00000599097 CNNM2Q9H8M5 875 aa20.45■□□□□ 0.86
HOMER3-210ENST00000599097 PDGFCQ9NRA1 345 aa20.45■□□□□ 0.86
HOMER3-210ENST00000599097 RBM47A0AV96 593 aaKnown RBP20.44■□□□□ 0.86
HOMER3-210ENST00000599097 CYP2C18P33260 490 aa20.44■□□□□ 0.86
HOMER3-210ENST00000599097 IMMTQ16891 758 aaKnown RBP20.44■□□□□ 0.86
HOMER3-210ENST00000599097 ASPRV1Q53RT3 343 aa20.44■□□□□ 0.86
HOMER3-210ENST00000599097 MCF2L2Q86YR7 1114 aa20.44■□□□□ 0.86
HOMER3-210ENST00000599097 OR6J1Q8NGC5 347 aa20.44■□□□□ 0.86
HOMER3-210ENST00000599097 MTG1Q9BT17 334 aaPredicted RBP20.44■□□□□ 0.86
HOMER3-210ENST00000599097 NOC4LQ9BVI4 516 aaKnown RBP20.44■□□□□ 0.86
HOMER3-210ENST00000599097 ALDH8A1Q9H2A2 487 aaPredicted RBP20.44■□□□□ 0.86
HOMER3-210ENST00000599097 RPS6P62753 249 aaKnown RBP20.43■□□□□ 0.86
HOMER3-210ENST00000599097 TTLL4Q14679 1199 aa20.43■□□□□ 0.86
HOMER3-210ENST00000599097 SLC30A10Q6XR72 485 aa20.43■□□□□ 0.86
HOMER3-210ENST00000599097 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
HOMER3-210ENST00000599097 PNMA1Q8ND90 353 aa20.43■□□□□ 0.86
HOMER3-210ENST00000599097 DSCC1Q9BVC3 393 aa20.43■□□□□ 0.86
HOMER3-210ENST00000599097 COL25A1Q9BXS0 654 aaPredicted RBP20.43■□□□□ 0.86
HOMER3-210ENST00000599097 KRT23Q9C075 422 aa20.43■□□□□ 0.86
HOMER3-210ENST00000599097 ABCB11O95342 1321 aa20.43■□□□□ 0.86
HOMER3-210ENST00000599097 LAMA4Q16363 1823 aa20.42■□□□□ 0.86
HOMER3-210ENST00000599097 B4GALT4O60513 344 aa20.42■□□□□ 0.86
HOMER3-210ENST00000599097 EDNRBP24530 442 aa20.42■□□□□ 0.86
HOMER3-210ENST00000599097 PURAQ00577 322 aaKnown RBP20.42■□□□□ 0.86
HOMER3-210ENST00000599097 NUCB1Q02818 461 aa20.42■□□□□ 0.86
HOMER3-210ENST00000599097 PTPN11Q06124 597 aaPredicted RBP20.42■□□□□ 0.86
HOMER3-210ENST00000599097 CLEC4DQ8WXI8 215 aa20.42■□□□□ 0.86
HOMER3-210ENST00000599097 UBAC1Q9BSL1 405 aa20.42■□□□□ 0.86
HOMER3-210ENST00000599097 PBX4Q9BYU1 374 aa20.42■□□□□ 0.86
HOMER3-210ENST00000599097 LCTP09848 1927 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 MYL3P08590 195 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 ACRP10323 421 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 ACTN1P12814 892 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 RFC2P35250 354 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 TRAF1Q13077 416 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 GRIN2CQ14957 1233 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 NFRKBQ6P4R8 1299 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
HOMER3-210ENST00000599097 C16orf59Q7L2K0 433 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 PLEKHM2Q8IWE5 1019 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 CCDC155Q8N6L0 562 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 TRPV6Q9H1D0 765 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 SLC28A3Q9HAS3 691 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 SLC4A7Q9Y6M7 1214 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 TNKSO95271 1327 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 NEDD4P46934 1319 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 UNC80Q8N2C7 3258 aa20.41■□□□□ 0.86
HOMER3-210ENST00000599097 DHX16O60231 1041 aaKnown RBP20.4■□□□□ 0.86
HOMER3-210ENST00000599097 KDM4AO75164 1064 aa20.4■□□□□ 0.86
HOMER3-210ENST00000599097 TXNP10599 105 aaKnown RBP20.4■□□□□ 0.86
HOMER3-210ENST00000599097 PSMC6P62333 389 aa20.4■□□□□ 0.86
HOMER3-210ENST00000599097 USH1GQ495M9 461 aa20.4■□□□□ 0.86
HOMER3-210ENST00000599097 NSUN6Q8TEA1 469 aaKnown RBP20.4■□□□□ 0.86
HOMER3-210ENST00000599097 ZSCAN10Q96SZ4 725 aaPredicted RBP20.4■□□□□ 0.86
HOMER3-210ENST00000599097 NOD1Q9Y239 953 aa20.4■□□□□ 0.86
HOMER3-210ENST00000599097 MRPL11Q9Y3B7 192 aaKnown RBP20.4■□□□□ 0.86
HOMER3-210ENST00000599097 GRIN2DO15399 1336 aa20.39■□□□□ 0.85
HOMER3-210ENST00000599097 A6NJR5 290 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms