RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 AIFM3Q96NN9 605 aa25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 VPS54Q9P1Q0 977 aa25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 SMCO2A6NFE2 343 aa25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 HOXA13P31271 388 aaPredicted RBP25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 HMGN5P82970 282 aaKnown RBP25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 CNTN2Q02246 1040 aa25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 SMARCC2Q8TAQ2 1214 aa25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 APBA2Q99767 749 aa25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 ALG1Q9BT22 464 aa25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 MAF1Q9H063 256 aa25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 PTPN22Q9Y2R2 807 aa25.44■■□□□ 1.66
CHMP2A-204ENST00000597848 DNAJC25-GNG10A0A024R161 153 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 XBP1P17861 261 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 ADCY7P51828 1080 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 MRPL12P52815 198 aaKnown RBP25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 IRF5Q13568 498 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 ZNF792Q3KQV3 632 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 SAMD3Q8N6K7 520 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 FAM184AQ8NB25 1140 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 CCDC148Q8NFR7 591 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 NPLOC4Q8TAT6 608 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 SYTL5Q8TDW5 730 aaPredicted RBP25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 SH3GLB2Q9NR46 395 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 PTCH2Q9Y6C5 1203 aa25.43■■□□□ 1.66
CHMP2A-204ENST00000597848 HOXC6P09630 235 aa25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 HSD17B4P51659 736 aa25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 NLRP5P59047 1200 aa25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 PURBQ96QR8 312 aaKnown RBP25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 C6orf50Q9HD87 102 aa25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 MAP3K20Q9NYL2 800 aaKnown RBP25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 DOCK3Q8IZD9 2030 aa25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 PLXNB2O15031 1838 aa25.42■■□□□ 1.66
CHMP2A-204ENST00000597848 ADCY3O60266 1144 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 XRCC5P13010 732 aaKnown RBP25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 FOSBP53539 338 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 CUL4AQ13619 759 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 PKN2Q16513 984 aaKnown RBP25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 USP17L6PQ6QN14 398 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 FCHSD1Q86WN1 690 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 FAM133AQ8N9E0 248 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 GLT8D2Q9H1C3 349 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 RIC8AQ9NPQ8 531 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 SMC3Q9UQE7 1217 aa25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 DIS3Q9Y2L1 958 aaKnown RBP25.41■■□□□ 1.66
CHMP2A-204ENST00000597848 CCL14Q16627 93 aa25.4■■□□□ 1.66
CHMP2A-204ENST00000597848 ADD3Q9UEY8 706 aaKnown RBP25.4■■□□□ 1.66
CHMP2A-204ENST00000597848 ESYT2A0FGR8 921 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 SOWAHBA6NEL2 793 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 ELNP15502 786 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 GNA11P29992 359 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 GHRHRQ02643 423 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 TRIM29Q14134 588 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 UBE2SQ16763 222 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 FBXO46Q6PJ61 603 aaPredicted RBP25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 TRMT44Q8IYL2 757 aaKnown RBP25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 MAML3Q96JK9 1138 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 TAAR1Q96RJ0 339 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 ZMYND12Q9H0C1 365 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 FOXD4L1Q9NU39 408 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 COL20A1Q9P218 1284 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 KIF3AQ9Y496 699 aa25.39■■□□□ 1.66
CHMP2A-204ENST00000597848 PIK3CDO00329 1044 aa25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 MEIS2O14770 477 aa25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 HSP90AA1P07900 732 aaKnown RBP25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 SHISA4Q96DD7 197 aa25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 GJB4Q9NTQ9 266 aa25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 FLRT1Q9NZU1 646 aa25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 BIN2Q9UBW5 565 aaPredicted RBP25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 KCNJ14Q9UNX9 436 aa25.38■■□□□ 1.65
CHMP2A-204ENST00000597848 GJB2P29033 226 aa25.37■■□□□ 1.65
CHMP2A-204ENST00000597848 GRK4P32298 578 aa25.37■■□□□ 1.65
CHMP2A-204ENST00000597848 FAM177A1Q8N128 213 aaPredicted RBP25.37■■□□□ 1.65
CHMP2A-204ENST00000597848 SLAIN1Q8ND83 568 aa25.37■■□□□ 1.65
CHMP2A-204ENST00000597848 BICD2Q8TD16 824 aa25.37■■□□□ 1.65
CHMP2A-204ENST00000597848 PXYLP1Q8TE99 480 aa25.37■■□□□ 1.65
CHMP2A-204ENST00000597848 RMDN3Q96TC7 470 aa25.37■■□□□ 1.65
CHMP2A-204ENST00000597848 ZNFX1Q9P2E3 1918 aaKnown RBP25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 ZNF236Q9UL36 1845 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 BECN1Q14457 450 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 ARHGEF16Q5VV41 709 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 MFSD14CQ5VZR4 134 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 OLFML2BQ68BL8 750 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 ZNF467Q7Z7K2 595 aaPredicted RBP25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 DNERQ8NFT8 737 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 NSUN6Q8TEA1 469 aaKnown RBP25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 TRIB2Q92519 343 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 C8orf76Q96K31 380 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 FGD4Q96M96 766 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 MPHOSPH6Q99547 160 aaKnown RBP25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 TINF2Q9BSI4 451 aa25.36■■□□□ 1.65
CHMP2A-204ENST00000597848 ASB14A6NK59 587 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 SPDYE3A6NKU9 549 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 B4DLN1 442 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 ALDH5A1P51649 535 aaPredicted RBP25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 SLC9C1Q4G0N8 1177 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 JAKMIP3Q5VZ66 844 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 GALNT17Q6IS24 598 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 TEX2Q8IWB9 1127 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 REXO1Q8N1G1 1221 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms