RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 SLFN13Q68D06 897 aa13.02□□□□□ -0.33
ZNF548-207ENST00000597400 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.33
ZNF548-207ENST00000597400 MORC4Q8TE76 937 aa13.02□□□□□ -0.33
ZNF548-207ENST00000597400 OSBP2Q969R2 916 aa13.02□□□□□ -0.33
ZNF548-207ENST00000597400 TRERF1Q96PN7 1200 aa13.02□□□□□ -0.33
ZNF548-207ENST00000597400 SEZ6LQ9BYH1 1024 aa13.02□□□□□ -0.33
ZNF548-207ENST00000597400 Q9Y3F1 56 aa13.02□□□□□ -0.33
ZNF548-207ENST00000597400 ZEB2O60315 1214 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 TTLL1O95922 423 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 IQCF3P0C7M6 154 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 GPNMBQ14956 572 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 TCTN1Q2MV58 587 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 DUSP28Q4G0W2 176 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 KIAA1211Q6ZU35 1233 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
ZNF548-207ENST00000597400 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 CFAP54Q96N23 3096 aa13.01□□□□□ -0.33
ZNF548-207ENST00000597400 M0R2C6 588 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 MYL3P08590 195 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 KCTD1Q719H9 257 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 PHOSPHO2Q8TCD6 241 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 CTAGE1Q96RT6 745 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 SYNPO2Q9UMS6 1093 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
ZNF548-207ENST00000597400 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 GPAA1O43292 621 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 ACTN1P12814 892 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 MCCP23508 829 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 RFC2P35250 354 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 WDR5P61964 334 aaKnown RBP12.99□□□□□ -0.33
ZNF548-207ENST00000597400 DEFB103AP81534 67 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 FAM47CQ5HY64 1035 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 GIMAP6Q6P9H5 292 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 NSMFQ6X4W1 530 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 STAG1Q8WVM7 1258 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 POLR3EQ9NVU0 708 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
ZNF548-207ENST00000597400 ISY1Q9ULR0 285 aaKnown RBP12.99□□□□□ -0.33
ZNF548-207ENST00000597400 NFIBO00712 420 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 SMARCA5O60264 1052 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 FDX1P10109 184 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 IL9P15248 144 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 ALDH5A1P51649 535 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 IKQ13123 557 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 TKFCQ3LXA3 575 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 ZSCAN25Q6NSZ9 544 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 SLC30A10Q6XR72 485 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 ZNF444Q8N0Y2 327 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 OR6J1Q8NGC5 347 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 COPS5Q92905 334 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 MTG1Q9BT17 334 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 WDR11Q9BZH6 1224 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 UBE2ZQ9H832 354 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-207ENST00000597400 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 MTUS1Q9ULD2 1270 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 MYH6P13533 1939 aa12.98□□□□□ -0.33
ZNF548-207ENST00000597400 RALGAPA2Q2PPJ7 1873 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 MYO15AQ9UKN7 3530 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-207ENST00000597400 RBM47A0AV96 593 aaKnown RBP12.97□□□□□ -0.33
ZNF548-207ENST00000597400 PRR33A8MZF0 331 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 NMT2O60551 498 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 RAB11FIP3O75154 756 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 SLC1A4P43007 532 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 TDO2P48775 406 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 CPT1AP50416 773 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 BAATQ14032 418 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-207ENST00000597400 FAM178BQ8IXR5 827 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 APPBP2Q92624 585 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 IL17RBQ9NRM6 502 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 CCPG1Q9ULG6 757 aa12.97□□□□□ -0.33
ZNF548-207ENST00000597400 PLA2G6O60733 806 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 BAIAP3O94812 1187 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 ARIH2O95376 493 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 MRE11P49959 708 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 TFAP4Q01664 338 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 KBTBD3Q8NAB2 608 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 CHURC1Q8WUH1 139 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
ZNF548-207ENST00000597400 SEC62Q99442 399 aaKnown RBP12.96□□□□□ -0.33
ZNF548-207ENST00000597400 INCENPQ9NQS7 918 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
ZNF548-207ENST00000597400 MYO7AQ13402 2215 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 LINC01553A4QN01 128 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 A6NJR5 290 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 FOXP2O15409 715 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms