RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ADCY3O60266 1144 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 CFBP00751 764 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 CALML3P27482 149 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 NAPAP54920 295 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 RPS6P62753 249 aaKnown RBP16.54■□□□□ 0.24
VRK3-213ENST00000597215 GHRHRQ02643 423 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 ZNF792Q3KQV3 632 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 FAM133AQ8N9E0 248 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 NSUN7Q8NE18 718 aaKnown RBP16.54■□□□□ 0.24
VRK3-213ENST00000597215 NPLOC4Q8TAT6 608 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 PXYLP1Q8TE99 480 aa16.54■□□□□ 0.24
VRK3-213ENST00000597215 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
VRK3-213ENST00000597215 LLPHQ9BRT6 129 aaKnown RBP16.54■□□□□ 0.24
VRK3-213ENST00000597215 MAP3K20Q9NYL2 800 aaKnown RBP16.54■□□□□ 0.24
VRK3-213ENST00000597215 ORC3Q9UBD5 711 aaPredicted RBP16.54■□□□□ 0.24
VRK3-213ENST00000597215 LCTP09848 1927 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 GCOM1H8Y6P7 765 aaPredicted RBP16.53■□□□□ 0.24
VRK3-213ENST00000597215 POLR2MP0CAP2 368 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 GRK4P32298 578 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 HSD17B4P51659 736 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 OLFML2BQ68BL8 750 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 WASF1Q92558 559 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 CUL5Q93034 780 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 MAML3Q96JK9 1138 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 PSTPIP2Q9H939 334 aa16.53■□□□□ 0.24
VRK3-213ENST00000597215 ELNP15502 786 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 CNTN2Q02246 1040 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 IFFO2Q5TF58 517 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 TYW1BQ6NUM6 668 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 ZNF467Q7Z7K2 595 aaPredicted RBP16.52■□□□□ 0.24
VRK3-213ENST00000597215 TEX2Q8IWB9 1127 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 CCDC148Q8NFR7 591 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 SYTL5Q8TDW5 730 aaPredicted RBP16.52■□□□□ 0.24
VRK3-213ENST00000597215 TRIB2Q92519 343 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 TBC1D5Q92609 795 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 SNX21Q969T3 373 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 GLT8D2Q9H1C3 349 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.24
VRK3-213ENST00000597215 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
VRK3-213ENST00000597215 ESYT2A0FGR8 921 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 JAK2O60674 1132 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 HMGCRP04035 888 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 ADCY7P51828 1080 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 HMGN5P82970 282 aaKnown RBP16.51■□□□□ 0.23
VRK3-213ENST00000597215 CCL14Q16627 93 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 COL13A1Q5TAT6 717 aaPredicted RBP16.51■□□□□ 0.23
VRK3-213ENST00000597215 MFSD14CQ5VZR4 134 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 FAM177A1Q8N128 213 aaPredicted RBP16.51■□□□□ 0.23
VRK3-213ENST00000597215 MSL3Q8N5Y2 521 aaKnown RBP16.51■□□□□ 0.23
VRK3-213ENST00000597215 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 SMARCC2Q8TAQ2 1214 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 FGD4Q96M96 766 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 VPS54Q9P1Q0 977 aa16.51■□□□□ 0.23
VRK3-213ENST00000597215 LOC102724159A0A0B4J2E5 919 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 ASB14A6NK59 587 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 K7ELQ4 463 aaPredicted RBP16.5■□□□□ 0.23
VRK3-213ENST00000597215 PIK3CDO00329 1044 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 XBP1P17861 261 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 HOXA13P31271 388 aaPredicted RBP16.5■□□□□ 0.23
VRK3-213ENST00000597215 ALDH5A1P51649 535 aaPredicted RBP16.5■□□□□ 0.23
VRK3-213ENST00000597215 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
VRK3-213ENST00000597215 PWP2Q15269 919 aaKnown RBP16.5■□□□□ 0.23
VRK3-213ENST00000597215 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 MPHOSPH6Q99547 160 aaKnown RBP16.5■□□□□ 0.23
VRK3-213ENST00000597215 TINF2Q9BSI4 451 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 C6orf50Q9HD87 102 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 RIC8AQ9NPQ8 531 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 FLRT1Q9NZU1 646 aa16.5■□□□□ 0.23
VRK3-213ENST00000597215 BIN2Q9UBW5 565 aaPredicted RBP16.5■□□□□ 0.23
VRK3-213ENST00000597215 SYNGAP1Q96PV0 1343 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 B4DLN1 442 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 MEIS2O14770 477 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 DTNBO60941 627 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 INHAP05111 366 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 FDPSP14324 419 aaKnown RBP16.49■□□□□ 0.23
VRK3-213ENST00000597215 GNA11P29992 359 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 UBXN2AP68543 259 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 USP17L6PQ6QN14 398 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 FCHSD1Q86WN1 690 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 NSUN6Q8TEA1 469 aaKnown RBP16.49■□□□□ 0.23
VRK3-213ENST00000597215 SH3TC2Q8TF17 1288 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 AIFM3Q96NN9 605 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
VRK3-213ENST00000597215 RMDN3Q96TC7 470 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 ALG1Q9BT22 464 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 ZMYND12Q9H0C1 365 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 COL20A1Q9P218 1284 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 MCM3APO60318 1980 aa16.49■□□□□ 0.23
VRK3-213ENST00000597215 ASTN1O14525 1302 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 CENPFP49454 3210 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 IGHA2P01877 340 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 NLRP5P59047 1200 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 UBE2SQ16763 222 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 ARMCX2Q7L311 632 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms