RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 BAIAP3O94812 1187 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 NBPF20Q3BBV1 942 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 KIAA1211Q6ZU35 1233 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 HFE2Q6ZVN8 426 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 DDRGK1Q96HY6 314 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 KCNH6Q9H252 994 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 POLR3EQ9NVU0 708 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 ZDBF2Q9HCK1 2354 aa18.5■□□□□ 0.55
LIG1-214ENST00000597146 GRXCR2A6NFK2 248 aa18.49■□□□□ 0.55
LIG1-214ENST00000597146 MS4A1P11836 297 aa18.49■□□□□ 0.55
LIG1-214ENST00000597146 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
LIG1-214ENST00000597146 RETREG2Q8NC44 543 aa18.49■□□□□ 0.55
LIG1-214ENST00000597146 ZBED2Q9BTP6 218 aa18.49■□□□□ 0.55
LIG1-214ENST00000597146 VTA1Q9NP79 307 aa18.49■□□□□ 0.55
LIG1-214ENST00000597146 ISY1Q9ULR0 285 aaKnown RBP18.49■□□□□ 0.55
LIG1-214ENST00000597146 NLRC5Q86WI3 1866 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 CACNA1AO00555 2505 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 IGKV6D-41A0A0C4DH26 115 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 H3BQ06 376 aaPredicted RBP18.48■□□□□ 0.55
LIG1-214ENST00000597146 ALAS1P13196 640 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 DUSP28Q4G0W2 176 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 MUM1L1Q5H9M0 696 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 ERC1Q8IUD2 1116 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 CHMP4CQ96CF2 233 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 TRERF1Q96PN7 1200 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 MTG1Q9BT17 334 aaPredicted RBP18.48■□□□□ 0.55
LIG1-214ENST00000597146 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 PAG1Q9NWQ8 432 aa18.48■□□□□ 0.55
LIG1-214ENST00000597146 ARPP21Q9UBL0 812 aaPredicted RBP18.48■□□□□ 0.55
LIG1-214ENST00000597146 TECTAO75443 2155 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 POTEB3A0JP26 581 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 LINC01553A4QN01 128 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 SNAP25P60880 206 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 ERVK-21P61565 698 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 TCTN1Q2MV58 587 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 POTEBQ6S5H4 581 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 CEP95Q96GE4 821 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 TGS1Q96RS0 853 aaKnown RBP18.47■□□□□ 0.55
LIG1-214ENST00000597146 MKNK2Q9HBH9 465 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 CYP39A1Q9NYL5 469 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 SPTBN4Q9H254 2564 aa18.47■□□□□ 0.55
LIG1-214ENST00000597146 MICAL3Q7RTP6 2002 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 TMEM232C9JQI7 657 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 BMP3P12645 472 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 CPT1AP50416 773 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 BFSP2Q13515 415 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 GPNMBQ14956 572 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 OR6J1Q8NGC5 347 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 NEK9Q8TD19 979 aa18.46■□□□□ 0.55
LIG1-214ENST00000597146 PUS7LQ9H0K6 701 aaKnown RBP18.46■□□□□ 0.55
LIG1-214ENST00000597146 GJB5O95377 273 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 ZP2Q05996 745 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 SLFN13Q68D06 897 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 FAM117BQ6P1L5 589 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 NFRKBQ6P4R8 1299 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 GMCL1P1Q8NEA9 526 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 WDR11Q9BZH6 1224 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 GPHNQ9NQX3 736 aaPredicted RBP18.45■□□□□ 0.54
LIG1-214ENST00000597146 NOD1Q9Y239 953 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 KMT2EQ8IZD2 1858 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 MYO7AQ13402 2215 aa18.45■□□□□ 0.54
LIG1-214ENST00000597146 PRDM1O75626 825 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 STAT2P52630 851 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 CHMP4BP1P59074 171 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 IKQ13123 557 aaPredicted RBP18.44■□□□□ 0.54
LIG1-214ENST00000597146 NSMFQ6X4W1 530 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 PRSS33Q8NF86 280 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 MORC4Q8TE76 937 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 MKL1Q969V6 931 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 RAD9AQ99638 391 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 C17orf80Q9BSJ5 609 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.44■□□□□ 0.54
LIG1-214ENST00000597146 MTMR4Q9NYA4 1195 aa18.44■□□□□ 0.54
LIG1-214ENST00000597146 MINDY4BA8MYZ0 360 aa18.43■□□□□ 0.54
LIG1-214ENST00000597146 UBE3CQ15386 1083 aa18.43■□□□□ 0.54
LIG1-214ENST00000597146 TKFCQ3LXA3 575 aa18.43■□□□□ 0.54
LIG1-214ENST00000597146 RASGRP2Q7LDG7 609 aa18.43■□□□□ 0.54
LIG1-214ENST00000597146 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
LIG1-214ENST00000597146 FBXO22Q8NEZ5 403 aa18.43■□□□□ 0.54
LIG1-214ENST00000597146 CTAGE1Q96RT6 745 aa18.43■□□□□ 0.54
LIG1-214ENST00000597146 TTLL1O95922 423 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
LIG1-214ENST00000597146 FDX1P10109 184 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 RLBP1P12271 317 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 ALDH5A1P51649 535 aaPredicted RBP18.42■□□□□ 0.54
LIG1-214ENST00000597146 LRRFIP1Q32MZ4 808 aaKnown RBP18.42■□□□□ 0.54
LIG1-214ENST00000597146 PUS10Q3MIT2 529 aaKnown RBP18.42■□□□□ 0.54
LIG1-214ENST00000597146 SBK1Q52WX2 424 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 CNKSR3Q6P9H4 555 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 EP400NLQ6ZTU2 488 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 CLASRPQ8N2M8 674 aaKnown RBP18.42■□□□□ 0.54
LIG1-214ENST00000597146 COPS5Q92905 334 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 CRBNQ96SW2 442 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
LIG1-214ENST00000597146 ZFHX2Q9C0A1 2572 aaPredicted RBP18.42■□□□□ 0.54
LIG1-214ENST00000597146 NBNO60934 754 aa18.41■□□□□ 0.54
LIG1-214ENST00000597146 IRS1P35568 1242 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms