RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
ZNF558-204ENST00000596172 UBE2Q1Q7Z7E8 422 aa21.14■□□□□ 0.97
ZNF558-204ENST00000596172 RAB11FIP4Q86YS3 637 aa21.14■□□□□ 0.97
ZNF558-204ENST00000596172 DNERQ8NFT8 737 aa21.14■□□□□ 0.97
ZNF558-204ENST00000596172 ABHD16BQ9H3Z7 469 aa21.14■□□□□ 0.97
ZNF558-204ENST00000596172 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.14■□□□□ 0.97
ZNF558-204ENST00000596172 ASTN1O14525 1302 aa21.13■□□□□ 0.97
ZNF558-204ENST00000596172 CCDC196A0A1B0GTZ2 297 aa21.13■□□□□ 0.97
ZNF558-204ENST00000596172 SLC30A10Q6XR72 485 aa21.13■□□□□ 0.97
ZNF558-204ENST00000596172 ALDH8A1Q9H2A2 487 aaPredicted RBP21.13■□□□□ 0.97
ZNF558-204ENST00000596172 FAM217BQ9NTX9 383 aaPredicted RBP21.13■□□□□ 0.97
ZNF558-204ENST00000596172 SEC63Q9UGP8 760 aaKnown RBP21.13■□□□□ 0.97
ZNF558-204ENST00000596172 SMCHD1A6NHR9 2005 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 NID2Q14112 1375 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 GOLGA8AA7E2F4 631 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 GOLGA8BA8MQT2 603 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 OPLAHO14841 1288 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 CALML3P27482 149 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 FUT2Q10981 343 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 ACVR2BQ13705 512 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 TOB2Q14106 344 aaPredicted RBP21.12■□□□□ 0.97
ZNF558-204ENST00000596172 CMTR1Q8N1G2 835 aaKnown RBP21.12■□□□□ 0.97
ZNF558-204ENST00000596172 TBC1D5Q92609 795 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 UPF3BQ9BZI7 483 aaKnown RBP21.12■□□□□ 0.97
ZNF558-204ENST00000596172 KATNBL1Q9H079 304 aa21.12■□□□□ 0.97
ZNF558-204ENST00000596172 METAP2P50579 478 aaKnown RBP eCLIP21.11■□□□□ 0.97
ZNF558-204ENST00000596172 ALDH5A1P51649 535 aaPredicted RBP21.11■□□□□ 0.97
ZNF558-204ENST00000596172 HSD17B4P51659 736 aa21.11■□□□□ 0.97
ZNF558-204ENST00000596172 SYTL5Q8TDW5 730 aaPredicted RBP21.11■□□□□ 0.97
ZNF558-204ENST00000596172 PURBQ96QR8 312 aaKnown RBP21.11■□□□□ 0.97
ZNF558-204ENST00000596172 PDRG1Q9NUG6 133 aa21.11■□□□□ 0.97
ZNF558-204ENST00000596172 PLXNA1Q9UIW2 1896 aa21.11■□□□□ 0.97
ZNF558-204ENST00000596172 B4DLN1 442 aa21.1■□□□□ 0.97
ZNF558-204ENST00000596172 AKR1A1P14550 325 aa21.1■□□□□ 0.97
ZNF558-204ENST00000596172 EDNRBP24530 442 aa21.1■□□□□ 0.97
ZNF558-204ENST00000596172 PDIA3P30101 505 aaKnown RBP21.1■□□□□ 0.97
ZNF558-204ENST00000596172 CDC27P30260 824 aa21.1■□□□□ 0.97
ZNF558-204ENST00000596172 MRPL12P52815 198 aaKnown RBP21.1■□□□□ 0.97
ZNF558-204ENST00000596172 ZNF274Q96GC6 653 aaPredicted RBP21.1■□□□□ 0.97
ZNF558-204ENST00000596172 MPHOSPH6Q99547 160 aaKnown RBP21.1■□□□□ 0.97
ZNF558-204ENST00000596172 FAM184BQ9ULE4 1060 aa21.1■□□□□ 0.97
ZNF558-204ENST00000596172 GTF3C3Q9Y5Q9 886 aa21.1■□□□□ 0.97
ZNF558-204ENST00000596172 FARP2O94887 1054 aaPredicted RBP21.09■□□□□ 0.97
ZNF558-204ENST00000596172 ADD1P35611 737 aaKnown RBP21.09■□□□□ 0.97
ZNF558-204ENST00000596172 MNX1P50219 401 aaPredicted RBP21.09■□□□□ 0.97
ZNF558-204ENST00000596172 CCDC82Q8N4S0 544 aa21.09■□□□□ 0.97
ZNF558-204ENST00000596172 PIBF1Q8WXW3 757 aa21.09■□□□□ 0.97
ZNF558-204ENST00000596172 NAP1L2Q9ULW6 460 aaPredicted RBP21.09■□□□□ 0.97
ZNF558-204ENST00000596172 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
ZNF558-204ENST00000596172 CFBP00751 764 aa21.08■□□□□ 0.97
ZNF558-204ENST00000596172 NSUN6Q8TEA1 469 aaKnown RBP21.08■□□□□ 0.97
ZNF558-204ENST00000596172 IWS1Q96ST2 819 aa21.08■□□□□ 0.97
ZNF558-204ENST00000596172 VTA1Q9NP79 307 aa21.08■□□□□ 0.97
ZNF558-204ENST00000596172 COL20A1Q9P218 1284 aa21.08■□□□□ 0.97
ZNF558-204ENST00000596172 ZHX1Q9UKY1 873 aaPredicted RBP21.08■□□□□ 0.97
ZNF558-204ENST00000596172 MKI67P46013 3256 aaKnown RBP21.08■□□□□ 0.96
ZNF558-204ENST00000596172 BAZ2BQ9UIF8 2168 aaKnown RBP21.07■□□□□ 0.96
ZNF558-204ENST00000596172 GCOM1H8Y6P7 765 aaPredicted RBP21.07■□□□□ 0.96
ZNF558-204ENST00000596172 POLR2MP0CAP2 368 aa21.07■□□□□ 0.96
ZNF558-204ENST00000596172 RARBP10826 455 aa21.07■□□□□ 0.96
ZNF558-204ENST00000596172 CCDC144BQ3MJ40 725 aa21.07■□□□□ 0.96
ZNF558-204ENST00000596172 TEX2Q8IWB9 1127 aa21.07■□□□□ 0.96
ZNF558-204ENST00000596172 ARRDC4Q8NCT1 418 aa21.07■□□□□ 0.96
ZNF558-204ENST00000596172 TAAR1Q96RJ0 339 aa21.07■□□□□ 0.96
ZNF558-204ENST00000596172 V9GY48 417 aaPredicted RBP21.07■□□□□ 0.96
ZNF558-204ENST00000596172 PIK3CDO00329 1044 aa21.06■□□□□ 0.96
ZNF558-204ENST00000596172 DUSP11O75319 330 aaKnown RBP21.06■□□□□ 0.96
ZNF558-204ENST00000596172 ANKRD1Q15327 319 aa21.06■□□□□ 0.96
ZNF558-204ENST00000596172 IQSEC1Q6DN90 963 aa21.06■□□□□ 0.96
ZNF558-204ENST00000596172 NECAB2Q7Z6G3 386 aa21.06■□□□□ 0.96
ZNF558-204ENST00000596172 RMDN3Q96TC7 470 aa21.06■□□□□ 0.96
ZNF558-204ENST00000596172 RBM27Q9P2N5 1060 aaKnown RBP21.06■□□□□ 0.96
ZNF558-204ENST00000596172 hCG_1984214I3L0E3 225 aa21.05■□□□□ 0.96
ZNF558-204ENST00000596172 PDE4DQ08499 809 aa21.05■□□□□ 0.96
ZNF558-204ENST00000596172 TAPT1Q6NXT6 567 aa21.05■□□□□ 0.96
ZNF558-204ENST00000596172 ZNF713Q8N859 430 aaPredicted RBP21.05■□□□□ 0.96
ZNF558-204ENST00000596172 PAWRQ96IZ0 340 aaKnown RBP21.05■□□□□ 0.96
ZNF558-204ENST00000596172 XPNPEP3Q9NQH7 507 aa21.05■□□□□ 0.96
ZNF558-204ENST00000596172 hCG_1642624A0A1W2PR95 340 aa21.04■□□□□ 0.96
ZNF558-204ENST00000596172 RBM47A0AV96 593 aaKnown RBP21.04■□□□□ 0.96
ZNF558-204ENST00000596172 DNM1LO00429 736 aa21.04■□□□□ 0.96
ZNF558-204ENST00000596172 COL6A1P12109 1028 aa21.04■□□□□ 0.96
ZNF558-204ENST00000596172 IFNAR1P17181 557 aa21.04■□□□□ 0.96
ZNF558-204ENST00000596172 NTRK3Q16288 839 aa21.04■□□□□ 0.96
ZNF558-204ENST00000596172 ANO1Q5XXA6 986 aa21.04■□□□□ 0.96
ZNF558-204ENST00000596172 PXMP2Q9NR77 195 aa21.04■□□□□ 0.96
ZNF558-204ENST00000596172 DDX49Q9Y6V7 483 aaKnown RBP21.04■□□□□ 0.96
ZNF558-204ENST00000596172 PRPF3O43395 683 aaKnown RBP21.03■□□□□ 0.96
ZNF558-204ENST00000596172 HOXA13P31271 388 aaPredicted RBP21.03■□□□□ 0.96
ZNF558-204ENST00000596172 NKX3-2P78367 333 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 TNFAIP2Q03169 654 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 LRRC41Q15345 812 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 ARHGEF16Q5VV41 709 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 PPP1R18Q6NYC8 613 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 HEATR3Q7Z4Q2 680 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 FBXO16Q8IX29 292 aaPredicted RBP21.03■□□□□ 0.96
ZNF558-204ENST00000596172 DIS3LQ8TF46 1054 aaKnown RBP21.03■□□□□ 0.96
ZNF558-204ENST00000596172 PSTPIP2Q9H939 334 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 Q9Y3F1 56 aa21.03■□□□□ 0.96
ZNF558-204ENST00000596172 LCTP09848 1927 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms