RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 HEATR3Q7Z4Q2 680 aa22.29■■□□□ 1.16
PNKP-207ENST00000596014 GPKOWQ92917 476 aaPredicted RBP eCLIP22.29■■□□□ 1.16
PNKP-207ENST00000596014 ZSCAN31Q96LW9 406 aaPredicted RBP22.29■■□□□ 1.16
PNKP-207ENST00000596014 CALML3P27482 149 aa22.28■■□□□ 1.16
PNKP-207ENST00000596014 SSRP1Q08945 709 aaKnown RBP22.28■■□□□ 1.16
PNKP-207ENST00000596014 PKN1Q16512 942 aa22.28■■□□□ 1.16
PNKP-207ENST00000596014 WWC2Q6AWC2 1192 aa22.28■■□□□ 1.16
PNKP-207ENST00000596014 TRIM22Q8IYM9 498 aa22.28■■□□□ 1.16
PNKP-207ENST00000596014 CDKL5O76039 1030 aa22.27■■□□□ 1.16
PNKP-207ENST00000596014 CD2BP2O95400 341 aaKnown RBP22.27■■□□□ 1.16
PNKP-207ENST00000596014 CFBP00751 764 aa22.27■■□□□ 1.16
PNKP-207ENST00000596014 IGHA2P01877 340 aa22.27■■□□□ 1.16
PNKP-207ENST00000596014 GHRHRQ02643 423 aa22.27■■□□□ 1.16
PNKP-207ENST00000596014 OLFML2BQ68BL8 750 aa22.27■■□□□ 1.16
PNKP-207ENST00000596014 FGD4Q96M96 766 aa22.27■■□□□ 1.16
PNKP-207ENST00000596014 PURBQ96QR8 312 aaKnown RBP22.27■■□□□ 1.16
PNKP-207ENST00000596014 BIN2Q9UBW5 565 aaPredicted RBP22.27■■□□□ 1.16
PNKP-207ENST00000596014 SOWAHBA6NEL2 793 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 CTDNEP1O95476 244 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 HMGCRP04035 888 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 SCG2P13521 617 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 ZNF467Q7Z7K2 595 aaPredicted RBP22.26■■□□□ 1.15
PNKP-207ENST00000596014 TNS4Q8IZW8 715 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 ARMC5Q96C12 935 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 SH2B1Q9NRF2 756 aaPredicted RBP22.26■■□□□ 1.15
PNKP-207ENST00000596014 BARHL2Q9NY43 387 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 MCM3APO60318 1980 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 hCG_1984214I3L0E3 225 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 HSD17B4P51659 736 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 TRIM32Q13049 653 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 TYW1BQ6NUM6 668 aa22.26■■□□□ 1.15
PNKP-207ENST00000596014 ZNF713Q8N859 430 aaPredicted RBP22.26■■□□□ 1.15
PNKP-207ENST00000596014 SYTL5Q8TDW5 730 aaPredicted RBP22.26■■□□□ 1.15
PNKP-207ENST00000596014 MAP3K20Q9NYL2 800 aaKnown RBP22.26■■□□□ 1.15
PNKP-207ENST00000596014 ASTN1O14525 1302 aa22.25■■□□□ 1.15
PNKP-207ENST00000596014 INHAP05111 366 aa22.25■■□□□ 1.15
PNKP-207ENST00000596014 MCM2P49736 904 aa22.25■■□□□ 1.15
PNKP-207ENST00000596014 ST3GAL1Q11201 340 aa22.25■■□□□ 1.15
PNKP-207ENST00000596014 SAMD3Q8N6K7 520 aa22.25■■□□□ 1.15
PNKP-207ENST00000596014 TINF2Q9BSI4 451 aa22.25■■□□□ 1.15
PNKP-207ENST00000596014 ADD3Q9UEY8 706 aaKnown RBP22.25■■□□□ 1.15
PNKP-207ENST00000596014 GCOM1H8Y6P7 765 aaPredicted RBP22.24■■□□□ 1.15
PNKP-207ENST00000596014 STXBP3O00186 592 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 DTNBO60941 627 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 POLR2MP0CAP2 368 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 CYP2C19P33261 490 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 NAPAP54920 295 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 MFSD14CQ5VZR4 134 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 MAMDC4Q6UXC1 1216 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 MSL3Q8N5Y2 521 aaKnown RBP22.24■■□□□ 1.15
PNKP-207ENST00000596014 ZNF333Q96JL9 665 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 PSTPIP2Q9H939 334 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 COL20A1Q9P218 1284 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 BRCA2P51587 3418 aa22.24■■□□□ 1.15
PNKP-207ENST00000596014 DEXIO95424 95 aa22.23■■□□□ 1.15
PNKP-207ENST00000596014 HOXA13P31271 388 aaPredicted RBP22.23■■□□□ 1.15
PNKP-207ENST00000596014 CCDC83Q8IWF9 413 aa22.23■■□□□ 1.15
PNKP-207ENST00000596014 UBXN2AP68543 259 aa22.23■■□□□ 1.15
PNKP-207ENST00000596014 CACNB2Q08289 660 aaPredicted RBP22.23■■□□□ 1.15
PNKP-207ENST00000596014 PPP1R18Q6NYC8 613 aa22.23■■□□□ 1.15
PNKP-207ENST00000596014 NSUN7Q8NE18 718 aaKnown RBP22.23■■□□□ 1.15
PNKP-207ENST00000596014 ABHD8Q96I13 439 aa22.23■■□□□ 1.15
PNKP-207ENST00000596014 TAAR1Q96RJ0 339 aa22.23■■□□□ 1.15
PNKP-207ENST00000596014 STK36Q9NRP7 1315 aa22.22■■□□□ 1.15
PNKP-207ENST00000596014 PIK3CDO00329 1044 aa22.22■■□□□ 1.15
PNKP-207ENST00000596014 PRKAR2AP13861 404 aaKnown RBP22.22■■□□□ 1.15
PNKP-207ENST00000596014 MAP3K21Q5TCX8 1036 aa22.22■■□□□ 1.15
PNKP-207ENST00000596014 DNERQ8NFT8 737 aa22.22■■□□□ 1.15
PNKP-207ENST00000596014 TMX3Q96JJ7 454 aa22.22■■□□□ 1.15
PNKP-207ENST00000596014 ANP32EQ9BTT0 268 aa22.22■■□□□ 1.15
PNKP-207ENST00000596014 ASB14A6NK59 587 aa22.21■■□□□ 1.15
PNKP-207ENST00000596014 MEIS2O14770 477 aa22.21■■□□□ 1.15
PNKP-207ENST00000596014 MYCP01106 439 aaPredicted RBP22.21■■□□□ 1.15
PNKP-207ENST00000596014 ALDH5A1P51649 535 aaPredicted RBP22.21■■□□□ 1.15
PNKP-207ENST00000596014 USP17L6PQ6QN14 398 aa22.21■■□□□ 1.15
PNKP-207ENST00000596014 ORC3Q9UBD5 711 aaPredicted RBP22.21■■□□□ 1.15
PNKP-207ENST00000596014 SYNGAP1Q96PV0 1343 aa22.21■■□□□ 1.15
PNKP-207ENST00000596014 SMCO2A6NFE2 343 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 SNAI1O95863 264 aaPredicted RBP22.2■■□□□ 1.15
PNKP-207ENST00000596014 FDPSP14324 419 aaKnown RBP22.2■■□□□ 1.15
PNKP-207ENST00000596014 MRPL12P52815 198 aaKnown RBP22.2■■□□□ 1.15
PNKP-207ENST00000596014 MTFR1Q15390 333 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 ARMCX2Q7L311 632 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 FCHSD1Q86WN1 690 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 CUL5Q93034 780 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 RMDN3Q96TC7 470 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 RIC8AQ9NPQ8 531 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 VPS54Q9P1Q0 977 aa22.2■■□□□ 1.15
PNKP-207ENST00000596014 DDX49Q9Y6V7 483 aaKnown RBP22.2■■□□□ 1.15
PNKP-207ENST00000596014 KIAA0100Q14667 2235 aaKnown RBP22.2■■□□□ 1.14
PNKP-207ENST00000596014 LOC102724159A0A0B4J2E5 919 aa22.2■■□□□ 1.14
PNKP-207ENST00000596014 JAK2O60674 1132 aa22.2■■□□□ 1.14
PNKP-207ENST00000596014 PWP2Q15269 919 aaKnown RBP22.2■■□□□ 1.14
PNKP-207ENST00000596014 PRAMEF19Q5SWL8 479 aa22.2■■□□□ 1.14
PNKP-207ENST00000596014 SMARCC2Q8TAQ2 1214 aa22.2■■□□□ 1.14
PNKP-207ENST00000596014 NSUN6Q8TEA1 469 aaKnown RBP22.2■■□□□ 1.14
PNKP-207ENST00000596014 CCDC12Q8WUD4 166 aaPredicted RBP22.2■■□□□ 1.14
PNKP-207ENST00000596014 SHISA4Q96DD7 197 aa22.2■■□□□ 1.14
PNKP-207ENST00000596014 AIFM3Q96NN9 605 aa22.2■■□□□ 1.14
PNKP-207ENST00000596014 LLPHQ9BRT6 129 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms