RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 MRPL11Q9Y3B7 192 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 ALPK3Q96L96 1907 aa15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 NID2Q14112 1375 aa15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 BRCA2P51587 3418 aa15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 PPFIA3O75145 1194 aa15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 SGPL1O95470 568 aa15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 PDIA3P30101 505 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 GJA8P48165 433 aa15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 CCT2P78371 535 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 MAMDC4Q6UXC1 1216 aa15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 ARMCX2Q7L311 632 aa15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 ZNF467Q7Z7K2 595 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 NCOA5Q9HCD5 579 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-207ENST00000595631 SYNGAP1Q96PV0 1343 aa15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 CFBP00751 764 aa15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 ZNF865P0CJ78 1059 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 ALDH5A1P51649 535 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 RCAN1P53805 252 aa15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 EVCP57679 992 aa15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 STK3Q13188 491 aa15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 NOL8Q76FK4 1167 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 GPKOWQ92917 476 aaPredicted RBP eCLIP15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 LENG1Q96BZ8 264 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 SEC63Q9UGP8 760 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-207ENST00000595631 MYH7BA7E2Y1 1941 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 HOXA13P31271 388 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 AK2P54819 239 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 LHX8Q68G74 356 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 RGS22Q8NE09 1264 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 SYTL5Q8TDW5 730 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 TAAR1Q96RJ0 339 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 KIF2CQ99661 725 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 C22orf23Q9BZE7 217 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 KATNBL1Q9H079 304 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 CRISPLD2Q9H0B8 497 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 DDX20Q9UHI6 824 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 V9GY48 417 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 DOCK5Q9H7D0 1870 aa15.94■□□□□ 0.14
SHKBP1-207ENST00000595631 DTNBO60941 627 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 TFRCP02786 760 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 HSD17B4P51659 736 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 NEK4P51957 841 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 EEPD1Q7L9B9 569 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 HEATR3Q7Z4Q2 680 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 MCF2L2Q86YR7 1114 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 TPCN1Q9ULQ1 816 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
SHKBP1-207ENST00000595631 ASB14A6NK59 587 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 SEPT4O43236 478 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 ADCY6O43306 1168 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 LARGE1O95461 756 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 ACVR2BQ13705 512 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 NTRK3Q16288 839 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 WWC2Q6AWC2 1192 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 FBXO16Q8IX29 292 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 DIS3LQ8TF46 1054 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 PHKBQ93100 1093 aa15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 ZNF274Q96GC6 653 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 ALDH8A1Q9H2A2 487 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 ADD3Q9UEY8 706 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-207ENST00000595631 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 PTGS1P23219 599 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 RGS19P49795 217 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 GHRHRQ02643 423 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 TYW1BQ6NUM6 668 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 FCHSD1Q86WN1 690 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 MORC4Q8TE76 937 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 ABHD16BQ9H3Z7 469 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 PDGFCQ9NRA1 345 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 NRBP1Q9UHY1 535 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 OGDHLQ9ULD0 1010 aa15.91■□□□□ 0.14
SHKBP1-207ENST00000595631 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 GCOM1H8Y6P7 765 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 POLR2MP0CAP2 368 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 EIF2AK2P19525 551 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 RBM25P49756 843 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 TRAF1Q13077 416 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 PPP2R5BQ15173 497 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 CCDC144BQ3MJ40 725 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 TMEM63BQ5T3F8 832 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 USP17L6PQ6QN14 398 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 DNERQ8NFT8 737 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 RMDN3Q96TC7 470 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 SLC26A6Q9BXS9 759 aa15.9■□□□□ 0.14
SHKBP1-207ENST00000595631 STXBP3O00186 592 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 FARP2O94887 1054 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 AKR1A1P14550 325 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 EDNRBP24530 442 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 ADCYAP1R1P41586 468 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 PDE4DQ08499 809 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 SCRN1Q12765 414 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 PKN1Q16512 942 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 UBE2SQ16763 222 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 NECAB1Q8N987 351 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 IL31RAQ8NI17 732 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms