RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 ANKRD65E5RJM6 399 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 M0R2N6 131 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 FCER1AP12319 257 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 CDK8P49336 464 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 KRT26Q7Z3Y9 468 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 KIAA1328Q86T90 577 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 TUBGCP2Q9BSJ2 902 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 TTYH3Q9C0H2 523 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 UBA7P41226 1012 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 STK4Q13043 487 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 CSGALNACT2Q8N6G5 542 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 GIMAP8Q8ND71 665 aaPredicted RBP17.13■□□□□ 0.33
ZNF541-205ENST00000595558 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 JAKMIP2Q96AA8 810 aa17.13■□□□□ 0.33
ZNF541-205ENST00000595558 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
ZNF541-205ENST00000595558 CCDC194A0A1B0GVG4 234 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 TRIM21P19474 475 aaKnown RBP17.12■□□□□ 0.33
ZNF541-205ENST00000595558 CACNB3P54284 484 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 SPTY2D1Q68D10 685 aaPredicted RBP17.12■□□□□ 0.33
ZNF541-205ENST00000595558 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 ANKRD40Q6AI12 368 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 GJA10Q969M2 543 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 EYA3Q99504 573 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 LEMD3Q9Y2U8 911 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 A0A1W2PQC6 194 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 FAM196BA6NMK8 535 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 ZNF263O14978 683 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 RNF40O75150 1001 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 SRGNP10124 158 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 ERCC3P19447 782 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 EEF1GP26641 437 aaKnown RBP17.12■□□□□ 0.33
ZNF541-205ENST00000595558 SKIDA1Q1XH10 827 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 HSP90B2PQ58FF3 399 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 PAPD7Q5XG87 772 aaKnown RBP17.12■□□□□ 0.33
ZNF541-205ENST00000595558 LRRC47Q8N1G4 583 aaKnown RBP17.12■□□□□ 0.33
ZNF541-205ENST00000595558 PYM1Q9BRP8 204 aaKnown RBP17.12■□□□□ 0.33
ZNF541-205ENST00000595558 KBTBD4Q9NVX7 518 aa17.12■□□□□ 0.33
ZNF541-205ENST00000595558 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 RHOBTB3O94955 611 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 PLCG1P19174 1290 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 LEKR1Q6ZMV7 388 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 SRLQ86TD4 932 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 FAM71BQ8TC56 605 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 GBP3Q9H0R5 595 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 THAP9Q9H5L6 903 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 RRP15Q9Y3B9 282 aaKnown RBP17.11■□□□□ 0.33
ZNF541-205ENST00000595558 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
ZNF541-205ENST00000595558 PSMA7O14818 248 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 BAG3O95817 575 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 CALML3P27482 149 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 RHBDL3P58872 404 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 C2orf54Q08AI8 447 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 MEA1Q16626 185 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 TSR1Q2NL82 804 aaKnown RBP17.11■□□□□ 0.33
ZNF541-205ENST00000595558 CCDC178Q5BJE1 867 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
ZNF541-205ENST00000595558 PCMTD1Q96MG8 357 aaPredicted RBP17.11■□□□□ 0.33
ZNF541-205ENST00000595558 EXOC1Q9NV70 894 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 TMEM260Q9NX78 707 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 FLT1P17948 1338 aa17.11■□□□□ 0.33
ZNF541-205ENST00000595558 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 RAD21O60216 631 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 KIF5BP33176 963 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 TUBB4BP68371 445 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
ZNF541-205ENST00000595558 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 LRRC31Q6UY01 552 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 QTRT2Q9H974 415 aaKnown RBP17.1■□□□□ 0.33
ZNF541-205ENST00000595558 DDX4Q9NQI0 724 aaKnown RBP17.1■□□□□ 0.33
ZNF541-205ENST00000595558 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
ZNF541-205ENST00000595558 DNM2P50570 870 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 KCNB1Q14721 858 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 MIIPQ5JXC2 388 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
ZNF541-205ENST00000595558 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
ZNF541-205ENST00000595558 BIN2Q9UBW5 565 aaPredicted RBP17.1■□□□□ 0.33
ZNF541-205ENST00000595558 EPHB6O15197 1021 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 PDE4DQ08499 809 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 PIGSQ96S52 555 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 JADE2Q9NQC1 790 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 SMARCAL1Q9NZC9 954 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 LAMB1P07942 1786 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
ZNF541-205ENST00000595558 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 COA7Q96BR5 231 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 PSMB7Q99436 277 aa17.09■□□□□ 0.33
ZNF541-205ENST00000595558 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
ZNF541-205ENST00000595558 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms