RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 VPS53Q5VIR6 699 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 TTBK2Q6IQ55 1244 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 BTNL9Q6UXG8 535 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 VWCEQ96DN2 955 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 SCLYQ96I15 445 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 ASB2Q96Q27 587 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 ADD3Q9UEY8 706 aaKnown RBP22■■□□□ 1.11
PDE4C-208ENST00000595343 SLC4A7Q9Y6M7 1214 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 GBF1Q92538 1859 aa22■■□□□ 1.11
PDE4C-208ENST00000595343 CHD7Q9P2D1 2997 aa21.99■■□□□ 1.11
PDE4C-208ENST00000595343 NFIBO00712 420 aa21.99■■□□□ 1.11
PDE4C-208ENST00000595343 ALDH5A1P51649 535 aaPredicted RBP21.99■■□□□ 1.11
PDE4C-208ENST00000595343 RABGGTBP53611 331 aa21.99■■□□□ 1.11
PDE4C-208ENST00000595343 WDR11Q9BZH6 1224 aa21.99■■□□□ 1.11
PDE4C-208ENST00000595343 FGRP09769 529 aa21.98■■□□□ 1.11
PDE4C-208ENST00000595343 SYDE2Q5VT97 1194 aa21.98■■□□□ 1.11
PDE4C-208ENST00000595343 TRMT13Q9NUP7 481 aaKnown RBP21.98■■□□□ 1.11
PDE4C-208ENST00000595343 POLR3EQ9NVU0 708 aa21.98■■□□□ 1.11
PDE4C-208ENST00000595343 NCOR1O75376 2440 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 LOC102724159A0A0B4J2E5 919 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 RBM47A0AV96 593 aaKnown RBP21.97■■□□□ 1.11
PDE4C-208ENST00000595343 ZBBXA8MT70 800 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 SUPT20HL2P0C7V6 817 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 MRPS5P82675 430 aaKnown RBP21.97■■□□□ 1.11
PDE4C-208ENST00000595343 PURAQ00577 322 aaKnown RBP21.97■■□□□ 1.11
PDE4C-208ENST00000595343 PWP2Q15269 919 aaKnown RBP21.97■■□□□ 1.11
PDE4C-208ENST00000595343 ALX1Q15699 326 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 TOMM22Q9NS69 142 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 PCDHA11Q9Y5I1 949 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 SALL3Q9BXA9 1300 aa21.97■■□□□ 1.11
PDE4C-208ENST00000595343 PTPDC1A2A3K4 754 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 TOP1P11387 765 aaKnown RBP21.96■■□□□ 1.11
PDE4C-208ENST00000595343 CYP2C9P11712 490 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 MYOGP15173 224 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 CPT1AP50416 773 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 PPP2R2DQ66LE6 453 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 TMEM47Q9BQJ4 181 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 GPCPD1Q9NPB8 672 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 TNKSO95271 1327 aa21.96■■□□□ 1.11
PDE4C-208ENST00000595343 FRMPD2Q68DX3 1309 aaPredicted RBP21.96■■□□□ 1.11
PDE4C-208ENST00000595343 PFKMP08237 780 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 MYL3P08590 195 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 ATP2A2P16615 1042 aaKnown RBP21.95■■□□□ 1.1
PDE4C-208ENST00000595343 TTLL4Q14679 1199 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 RRP12Q5JTH9 1297 aaKnown RBP21.95■■□□□ 1.1
PDE4C-208ENST00000595343 SLC30A10Q6XR72 485 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 OR6J1Q8NGC5 347 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 ADAMTS19Q8TE59 1207 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 CLEC4DQ8WXI8 215 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 EVI5LQ96CN4 794 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 HELLSQ9NRZ9 838 aa21.95■■□□□ 1.1
PDE4C-208ENST00000595343 CALML3P27482 149 aa21.94■■□□□ 1.1
PDE4C-208ENST00000595343 MTG1Q9BT17 334 aaPredicted RBP21.94■■□□□ 1.1
PDE4C-208ENST00000595343 GPHNQ9NQX3 736 aaPredicted RBP21.94■■□□□ 1.1
PDE4C-208ENST00000595343 TCP11L1Q9NUJ3 509 aa21.94■■□□□ 1.1
PDE4C-208ENST00000595343 BDP1A6H8Y1 2624 aa21.93■■□□□ 1.1
PDE4C-208ENST00000595343 FGAP02671 866 aa21.93■■□□□ 1.1
PDE4C-208ENST00000595343 NBPF20Q3BBV1 942 aa21.93■■□□□ 1.1
PDE4C-208ENST00000595343 RNF207Q6ZRF8 634 aa21.93■■□□□ 1.1
PDE4C-208ENST00000595343 DEFB128Q7Z7B8 93 aa21.93■■□□□ 1.1
PDE4C-208ENST00000595343 PDHBP11177 359 aa21.92■■□□□ 1.1
PDE4C-208ENST00000595343 PDE4DQ08499 809 aa21.92■■□□□ 1.1
PDE4C-208ENST00000595343 BRDTQ58F21 947 aaPredicted RBP21.92■■□□□ 1.1
PDE4C-208ENST00000595343 FAM47CQ5HY64 1035 aa21.92■■□□□ 1.1
PDE4C-208ENST00000595343 UHRF1Q96T88 793 aaPredicted RBP21.92■■□□□ 1.1
PDE4C-208ENST00000595343 PNMA2Q9UL42 364 aa21.92■■□□□ 1.1
PDE4C-208ENST00000595343 SCN10AQ9Y5Y9 1956 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 NKRFO15226 690 aaKnown RBP eCLIP21.91■■□□□ 1.1
PDE4C-208ENST00000595343 COL9A1P20849 921 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 RPS6P62753 249 aaKnown RBP21.91■■□□□ 1.1
PDE4C-208ENST00000595343 PPP2R5BQ15173 497 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 TMEM67Q5HYA8 995 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 ANKRD45Q5TZF3 282 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 MICALL1Q8N3F8 863 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 IL27Q8NEV9 243 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 PPP1R13LQ8WUF5 828 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 FAM227BQ96M60 508 aa21.91■■□□□ 1.1
PDE4C-208ENST00000595343 MPHOSPH6Q99547 160 aaKnown RBP21.91■■□□□ 1.1
PDE4C-208ENST00000595343 TSPYL2Q9H2G4 693 aaPredicted RBP21.91■■□□□ 1.1
PDE4C-208ENST00000595343 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
PDE4C-208ENST00000595343 SCN5AQ14524 2016 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 RAD50Q92878 1312 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 A0A0D9SFI3 127 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 A6NJR5 290 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 EDNRBP24530 442 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 ZNF543Q08ER8 600 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 MCMDC2Q4G0Z9 681 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 NFRKBQ6P4R8 1299 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 DNERQ8NFT8 737 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 SCFD2Q8WU76 684 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 COPS5Q92905 334 aa21.9■■□□□ 1.1
PDE4C-208ENST00000595343 WDR19Q8NEZ3 1342 aa21.89■■□□□ 1.1
PDE4C-208ENST00000595343 KPNA6O60684 536 aa21.89■■□□□ 1.09
PDE4C-208ENST00000595343 CA3P07451 260 aa21.89■■□□□ 1.09
PDE4C-208ENST00000595343 HSPD1P10809 573 aaKnown RBP21.89■■□□□ 1.09
PDE4C-208ENST00000595343 ACTN1P12814 892 aa21.89■■□□□ 1.09
PDE4C-208ENST00000595343 RFC2P35250 354 aa21.89■■□□□ 1.09
PDE4C-208ENST00000595343 PDE1AP54750 535 aa21.89■■□□□ 1.09
PDE4C-208ENST00000595343 TTC14Q96N46 770 aa21.89■■□□□ 1.09
PDE4C-208ENST00000595343 TRANK1O15050 2925 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms