RNA–Protein interactions for RNA: ENST00000594794.5

HOMER3-207, Transcript of homer scaffold protein 3, humanhuman

TSL 5 BASIC

Gene HOMER3, Length 903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-207ENST00000594794 CYB5R4Q7L1T6 521 aa28.33■■■□□ 2.13
HOMER3-207ENST00000594794 RUFY2Q8WXA3 655 aa28.33■■■□□ 2.13
HOMER3-207ENST00000594794 PDGFCQ9NRA1 345 aa28.33■■■□□ 2.13
HOMER3-207ENST00000594794 LRRC37A2A6NM11 1700 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 MFSD5Q6N075 450 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 SLC30A10Q6XR72 485 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 FAM126BQ8IXS8 530 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 SLC43A3Q8NBI5 491 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 UBAC1Q9BSL1 405 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 MAF1Q9H063 256 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 CNNM2Q9H8M5 875 aa28.32■■■□□ 2.12
HOMER3-207ENST00000594794 TLR3O15455 904 aaKnown RBP28.31■■■□□ 2.12
HOMER3-207ENST00000594794 ZEB2O60315 1214 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 CALML3P27482 149 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 EPHB4P54760 987 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 USH1GQ495M9 461 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 TMEM63BQ5T3F8 832 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 TAPT1Q6NXT6 567 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 TLK2Q86UE8 772 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 FBXO16Q8IX29 292 aaPredicted RBP28.31■■■□□ 2.12
HOMER3-207ENST00000594794 RNPC3Q96LT9 517 aaKnown RBP28.31■■■□□ 2.12
HOMER3-207ENST00000594794 TAF6LQ9Y6J9 622 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 WDR19Q8NEZ3 1342 aa28.31■■■□□ 2.12
HOMER3-207ENST00000594794 LCTP09848 1927 aa28.3■■■□□ 2.12
HOMER3-207ENST00000594794 BEX3Q00994 111 aa28.3■■■□□ 2.12
HOMER3-207ENST00000594794 VTI1AQ96AJ9 217 aa28.3■■■□□ 2.12
HOMER3-207ENST00000594794 AP5M1Q9H0R1 490 aa28.3■■■□□ 2.12
HOMER3-207ENST00000594794 SEMA6BQ9H3T3 888 aa28.3■■■□□ 2.12
HOMER3-207ENST00000594794 CD4P01730 458 aa28.29■■■□□ 2.12
HOMER3-207ENST00000594794 CYP21A2P08686 494 aa28.29■■■□□ 2.12
HOMER3-207ENST00000594794 SMPD1P17405 629 aa28.29■■■□□ 2.12
HOMER3-207ENST00000594794 PPIGQ13427 754 aaKnown RBP eCLIP28.29■■■□□ 2.128e-7■■■■□ 26.1
HOMER3-207ENST00000594794 FSCN1Q16658 493 aaKnown RBP28.29■■■□□ 2.12
HOMER3-207ENST00000594794 SKAP1Q86WV1 359 aa28.29■■■□□ 2.12
HOMER3-207ENST00000594794 ADGRF4Q8IZF3 695 aa28.29■■■□□ 2.12
HOMER3-207ENST00000594794 SGSM2O43147 1006 aa28.28■■■□□ 2.12
HOMER3-207ENST00000594794 ALDH5A1P51649 535 aaPredicted RBP28.28■■■□□ 2.12
HOMER3-207ENST00000594794 IFIT1BQ5T764 474 aaKnown RBP28.28■■■□□ 2.12
HOMER3-207ENST00000594794 RNF207Q6ZRF8 634 aa28.28■■■□□ 2.12
HOMER3-207ENST00000594794 VAT1LQ9HCJ6 419 aa28.28■■■□□ 2.12
HOMER3-207ENST00000594794 A0A0C4DFX4 3053 aa28.28■■■□□ 2.12
HOMER3-207ENST00000594794 CUL9Q8IWT3 2517 aa28.27■■■□□ 2.12
HOMER3-207ENST00000594794 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.27■■■□□ 2.12
HOMER3-207ENST00000594794 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.27■■■□□ 2.12
HOMER3-207ENST00000594794 SEC23AQ15436 765 aa28.27■■■□□ 2.12
HOMER3-207ENST00000594794 CDC37Q16543 378 aaPredicted RBP28.27■■■□□ 2.12
HOMER3-207ENST00000594794 ASPRV1Q53RT3 343 aa28.27■■■□□ 2.12
HOMER3-207ENST00000594794 TMEM199Q8N511 208 aa28.27■■■□□ 2.12
HOMER3-207ENST00000594794 RBM47A0AV96 593 aaKnown RBP28.26■■■□□ 2.11
HOMER3-207ENST00000594794 DYNC1LI2O43237 492 aaPredicted RBP28.26■■■□□ 2.11
HOMER3-207ENST00000594794 PARP1P09874 1014 aaKnown RBP28.26■■■□□ 2.11
HOMER3-207ENST00000594794 RPS6P62753 249 aaKnown RBP28.26■■■□□ 2.11
HOMER3-207ENST00000594794 DUSP28Q4G0W2 176 aa28.26■■■□□ 2.11
HOMER3-207ENST00000594794 STAG2Q8N3U4 1231 aa28.26■■■□□ 2.11
HOMER3-207ENST00000594794 U3KPZ7 1027 aaPredicted RBP28.26■■■□□ 2.11
HOMER3-207ENST00000594794 DHX16O60231 1041 aaKnown RBP28.25■■■□□ 2.11
HOMER3-207ENST00000594794 TRDNQ13061 729 aa28.25■■■□□ 2.11
HOMER3-207ENST00000594794 CXCL17Q6UXB2 119 aa28.25■■■□□ 2.11
HOMER3-207ENST00000594794 KIAA1211Q6ZU35 1233 aa28.25■■■□□ 2.11
HOMER3-207ENST00000594794 RGS22Q8NE09 1264 aa28.25■■■□□ 2.11
HOMER3-207ENST00000594794 DNERQ8NFT8 737 aa28.25■■■□□ 2.11
HOMER3-207ENST00000594794 MPHOSPH6Q99547 160 aaKnown RBP28.25■■■□□ 2.11
HOMER3-207ENST00000594794 CDX2Q99626 313 aaPredicted RBP28.25■■■□□ 2.11
HOMER3-207ENST00000594794 ITGA7Q13683 1181 aa28.24■■■□□ 2.11
HOMER3-207ENST00000594794 STOX1Q6ZVD7 989 aa28.24■■■□□ 2.11
HOMER3-207ENST00000594794 TBC1D5Q92609 795 aa28.24■■■□□ 2.11
HOMER3-207ENST00000594794 FAM161BQ96MY7 647 aa28.24■■■□□ 2.11
HOMER3-207ENST00000594794 TTYH1Q9H313 450 aaPredicted RBP28.24■■■□□ 2.11
HOMER3-207ENST00000594794 JMJD4Q9H9V9 463 aa28.24■■■□□ 2.11
HOMER3-207ENST00000594794 SENP2Q9HC62 589 aa28.24■■■□□ 2.11
HOMER3-207ENST00000594794 E7EWF7 191 aa28.23■■■□□ 2.11
HOMER3-207ENST00000594794 QRICH1Q2TAL8 776 aa28.23■■■□□ 2.11
HOMER3-207ENST00000594794 RASIP1Q5U651 963 aa28.23■■■□□ 2.11
HOMER3-207ENST00000594794 CHST3Q7LGC8 479 aa28.23■■■□□ 2.11
HOMER3-207ENST00000594794 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.23■■■□□ 2.11
HOMER3-207ENST00000594794 NKRFO15226 690 aaKnown RBP eCLIP28.22■■■□□ 2.11
HOMER3-207ENST00000594794 EDNRBP24530 442 aa28.22■■■□□ 2.11
HOMER3-207ENST00000594794 TMEM240Q5SV17 173 aa28.22■■■□□ 2.11
HOMER3-207ENST00000594794 PSRC1Q6PGN9 363 aaPredicted RBP28.22■■■□□ 2.11
HOMER3-207ENST00000594794 B4DLN1 442 aa28.21■■■□□ 2.11
HOMER3-207ENST00000594794 IFIT3O14879 490 aaKnown RBP28.21■■■□□ 2.11
HOMER3-207ENST00000594794 MRPL12P52815 198 aaKnown RBP28.21■■■□□ 2.11
HOMER3-207ENST00000594794 C16orf59Q7L2K0 433 aa28.21■■■□□ 2.11
HOMER3-207ENST00000594794 MAP4K1Q92918 833 aa28.21■■■□□ 2.11
HOMER3-207ENST00000594794 WDR11Q9BZH6 1224 aa28.21■■■□□ 2.11
HOMER3-207ENST00000594794 RBM8AQ9Y5S9 174 aaKnown RBP28.21■■■□□ 2.11
HOMER3-207ENST00000594794 CDH23Q9H251 3354 aa28.21■■■□□ 2.11
HOMER3-207ENST00000594794 GRIN2DO15399 1336 aa28.2■■■□□ 2.11
HOMER3-207ENST00000594794 PDE4DQ08499 809 aa28.2■■■□□ 2.1
HOMER3-207ENST00000594794 RALYLQ86SE5 291 aaKnown RBP28.2■■■□□ 2.1
HOMER3-207ENST00000594794 FBXO11Q86XK2 927 aa28.2■■■□□ 2.1
HOMER3-207ENST00000594794 POLR3EQ9NVU0 708 aa28.2■■■□□ 2.1
HOMER3-207ENST00000594794 ABCB11O95342 1321 aa28.19■■■□□ 2.1
HOMER3-207ENST00000594794 KLRF2D3W0D1 207 aa28.19■■■□□ 2.1
HOMER3-207ENST00000594794 CSF2RAP15509 400 aa28.19■■■□□ 2.1
HOMER3-207ENST00000594794 CPT1AP50416 773 aa28.19■■■□□ 2.1
HOMER3-207ENST00000594794 NCOA7Q8NI08 942 aa28.19■■■□□ 2.1
HOMER3-207ENST00000594794 MAD2L2Q9UI95 211 aa28.19■■■□□ 2.1
HOMER3-207ENST00000594794 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.18■■■□□ 2.1
HOMER3-207ENST00000594794 HIPK3Q9H422 1215 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms