RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 GNPATO15228 680 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 CYLC1P35663 651 aaPredicted RBP18.41■□□□□ 0.54
LIG1-206ENST00000594067 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 LRRC31Q6UY01 552 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 NOC4LQ9BVI4 516 aaKnown RBP18.41■□□□□ 0.54
LIG1-206ENST00000594067 CUEDC2Q9H467 287 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 BICDL2A1A5D9 508 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 USP14P54578 494 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 CYP27A1Q02318 531 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
LIG1-206ENST00000594067 KRT25Q7Z3Z0 450 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 AK8Q96MA6 479 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 FAM204AQ9H8W3 233 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 DUSP10Q9Y6W6 482 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 MAST2Q6P0Q8 1798 aa18.41■□□□□ 0.54
LIG1-206ENST00000594067 CCDC88AQ3V6T2 1871 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 KRT86O43790 486 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 SYF2O95926 243 aaKnown RBP18.4■□□□□ 0.54
LIG1-206ENST00000594067 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
LIG1-206ENST00000594067 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 C7orf25Q9BPX7 421 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 NUP58Q9BVL2 599 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 ACBD3Q9H3P7 528 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 VIPAS39Q9H9C1 493 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 ZBED6P86452 979 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 NFIXQ14938 502 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 MIIPQ5JXC2 388 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 EYA3Q99504 573 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 MAGEF1Q9HAY2 307 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 C6orf50Q9HD87 102 aa18.4■□□□□ 0.54
LIG1-206ENST00000594067 KDM4FA0A1W2PPD8 638 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 RPS6KA4O75676 772 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 AARSP49588 968 aaKnown RBP eCLIP18.39■□□□□ 0.542e-6■■■■□ 24
LIG1-206ENST00000594067 GSTO1P78417 241 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 PAPD7Q5XG87 772 aaKnown RBP18.39■□□□□ 0.54
LIG1-206ENST00000594067 NEK8Q86SG6 692 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 NRAPQ86VF7 1730 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 TBCKQ8TEA7 893 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 MMTAG2Q9BU76 263 aaKnown RBP18.39■□□□□ 0.54
LIG1-206ENST00000594067 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 SLC39A2Q9NP94 309 aa18.39■□□□□ 0.54
LIG1-206ENST00000594067 BIN2Q9UBW5 565 aaPredicted RBP18.39■□□□□ 0.54
LIG1-206ENST00000594067 IPO7O95373 1038 aaKnown RBP18.39■□□□□ 0.53
LIG1-206ENST00000594067 TNNT3P45378 269 aaPredicted RBP18.39■□□□□ 0.53
LIG1-206ENST00000594067 CDK8P49336 464 aa18.39■□□□□ 0.53
LIG1-206ENST00000594067 PPP4CP60510 307 aa18.39■□□□□ 0.53
LIG1-206ENST00000594067 SEMA3FQ13275 785 aa18.39■□□□□ 0.53
LIG1-206ENST00000594067 FAM114A1Q8IWE2 563 aa18.39■□□□□ 0.53
LIG1-206ENST00000594067 KIAA0895Q8NCT3 520 aa18.39■□□□□ 0.53
LIG1-206ENST00000594067 MACROD2A1Z1Q3 448 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 EIF3CLB5ME19 914 aaKnown RBP18.38■□□□□ 0.53
LIG1-206ENST00000594067 RNF40O75150 1001 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 TXKP42681 527 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 SOGA3Q5TF21 947 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 RRP36Q96EU6 259 aaKnown RBP18.38■□□□□ 0.53
LIG1-206ENST00000594067 PIGSQ96S52 555 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 EIF3CQ99613 913 aaKnown RBP18.38■□□□□ 0.53
LIG1-206ENST00000594067 TMEM260Q9NX78 707 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 ZNF185O15231 689 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 PRPF6O94906 941 aaKnown RBP18.38■□□□□ 0.53
LIG1-206ENST00000594067 NT5C2P49902 561 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 RTFDC1Q9BY42 306 aaPredicted RBP18.38■□□□□ 0.53
LIG1-206ENST00000594067 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 SEMA6BQ9H3T3 888 aa18.38■□□□□ 0.53
LIG1-206ENST00000594067 ZMYND10O75800 440 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 PLEKP08567 350 aaPredicted RBP18.37■□□□□ 0.53
LIG1-206ENST00000594067 GNA11P29992 359 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 BTDP43251 543 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 GPIHBP1Q8IV16 184 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 CCDC170Q8IYT3 715 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 EHBP1Q8NDI1 1231 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 ZC3H4Q9UPT8 1303 aaKnown RBP18.37■□□□□ 0.53
LIG1-206ENST00000594067 AMPD3Q01432 767 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 ZNF662Q6ZS27 426 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 CAGE1Q8TC20 777 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
LIG1-206ENST00000594067 HPCAL4Q9UM19 191 aa18.37■□□□□ 0.53
LIG1-206ENST00000594067 AHDC1Q5TGY3 1603 aaPredicted RBP18.37■□□□□ 0.53
LIG1-206ENST00000594067 RGL2O15211 777 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 LDHCP07864 332 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 NOP2P46087 812 aaKnown RBP18.36■□□□□ 0.53
LIG1-206ENST00000594067 FKBP15Q5T1M5 1219 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 CNNM4Q6P4Q7 775 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 SMCR8Q8TEV9 937 aaPredicted RBP18.36■□□□□ 0.53
LIG1-206ENST00000594067 EFCC1Q9HA90 598 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 LRWD1Q9UFC0 647 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 ZNF263O14978 683 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 IDEP14735 1019 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
LIG1-206ENST00000594067 TEX11Q8IYF3 940 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 ERGIC2Q96RQ1 377 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 SNED1Q8TER0 1413 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 PDE2AO00408 941 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms