RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 HELLSQ9NRZ9 838 aa20.62■□□□□ 0.89
RETREG3-212ENST00000593251 ZBTB47Q9UFB7 747 aaPredicted RBP20.62■□□□□ 0.89
RETREG3-212ENST00000593251 MSRAQ9UJ68 235 aa20.62■□□□□ 0.89
RETREG3-212ENST00000593251 YBX2Q9Y2T7 364 aaKnown RBP20.62■□□□□ 0.89
RETREG3-212ENST00000593251 Q9Y3F1 56 aa20.62■□□□□ 0.89
RETREG3-212ENST00000593251 REV3LO60673 3130 aa20.62■□□□□ 0.89
RETREG3-212ENST00000593251 FGAP02671 866 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 FGRP09769 529 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 ADGRE1Q14246 886 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 ALX1Q15699 326 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 RAB30Q15771 203 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 CCDC85BQ15834 202 aaPredicted RBP20.61■□□□□ 0.89
RETREG3-212ENST00000593251 DUSP28Q4G0W2 176 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 TJAP1Q5JTD0 557 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 BTNL9Q6UXG8 535 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 SLC30A10Q6XR72 485 aa20.61■□□□□ 0.89
RETREG3-212ENST00000593251 MTIF3Q9H2K0 278 aaKnown RBP20.61■□□□□ 0.89
RETREG3-212ENST00000593251 ADD3Q9UEY8 706 aaKnown RBP20.61■□□□□ 0.89
RETREG3-212ENST00000593251 TOP1P11387 765 aaKnown RBP20.6■□□□□ 0.89
RETREG3-212ENST00000593251 CALML3P27482 149 aa20.6■□□□□ 0.89
RETREG3-212ENST00000593251 RABGGTBP53611 331 aa20.6■□□□□ 0.89
RETREG3-212ENST00000593251 HAND2P61296 217 aa20.6■□□□□ 0.89
RETREG3-212ENST00000593251 PPP1R13LQ8WUF5 828 aa20.6■□□□□ 0.89
RETREG3-212ENST00000593251 WDR11Q9BZH6 1224 aa20.6■□□□□ 0.89
RETREG3-212ENST00000593251 ALDH8A1Q9H2A2 487 aaPredicted RBP20.6■□□□□ 0.89
RETREG3-212ENST00000593251 TRMT13Q9NUP7 481 aaKnown RBP20.6■□□□□ 0.89
RETREG3-212ENST00000593251 SCN10AQ9Y5Y9 1956 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 MYH6P13533 1939 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 MYL3P08590 195 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 CYP2C9P11712 490 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 IGFBP4P22692 258 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 PDE1AP54750 535 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 VWCEQ96DN2 955 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 SEZ6LQ9BYH1 1024 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 SLC28A3Q9HAS3 691 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 TTC28Q96AY4 2481 aa20.59■□□□□ 0.89
RETREG3-212ENST00000593251 ZBBXA8MT70 800 aa20.58■□□□□ 0.89
RETREG3-212ENST00000593251 PDHBP11177 359 aa20.58■□□□□ 0.89
RETREG3-212ENST00000593251 MYOGP15173 224 aa20.58■□□□□ 0.89
RETREG3-212ENST00000593251 MCMDC2Q4G0Z9 681 aa20.58■□□□□ 0.89
RETREG3-212ENST00000593251 ZNF589Q86UQ0 364 aaPredicted RBP20.58■□□□□ 0.89
RETREG3-212ENST00000593251 CLEC4DQ8WXI8 215 aa20.58■□□□□ 0.89
RETREG3-212ENST00000593251 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.88
RETREG3-212ENST00000593251 TRIP12Q14669 1992 aaPredicted RBP20.57■□□□□ 0.88
RETREG3-212ENST00000593251 HSPD1P10809 573 aaKnown RBP20.57■□□□□ 0.88
RETREG3-212ENST00000593251 PURAQ00577 322 aaKnown RBP20.57■□□□□ 0.88
RETREG3-212ENST00000593251 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
RETREG3-212ENST00000593251 AKNAD1Q5T1N1 836 aa20.57■□□□□ 0.88
RETREG3-212ENST00000593251 RNF207Q6ZRF8 634 aa20.57■□□□□ 0.88
RETREG3-212ENST00000593251 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
RETREG3-212ENST00000593251 OR6J1Q8NGC5 347 aa20.57■□□□□ 0.88
RETREG3-212ENST00000593251 CRBNQ96SW2 442 aa20.57■□□□□ 0.88
RETREG3-212ENST00000593251 TCP11L1Q9NUJ3 509 aa20.57■□□□□ 0.88
RETREG3-212ENST00000593251 POLR3EQ9NVU0 708 aa20.57■□□□□ 0.88
RETREG3-212ENST00000593251 SLC4A7Q9Y6M7 1214 aa20.57■□□□□ 0.88
RETREG3-212ENST00000593251 TNKSO95271 1327 aa20.56■□□□□ 0.88
RETREG3-212ENST00000593251 LAMA4Q16363 1823 aa20.56■□□□□ 0.88
RETREG3-212ENST00000593251 RBM47A0AV96 593 aaKnown RBP20.56■□□□□ 0.88
RETREG3-212ENST00000593251 CPT1AP50416 773 aa20.56■□□□□ 0.88
RETREG3-212ENST00000593251 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
RETREG3-212ENST00000593251 DEFB128Q7Z7B8 93 aa20.56■□□□□ 0.88
RETREG3-212ENST00000593251 COPS5Q92905 334 aa20.56■□□□□ 0.88
RETREG3-212ENST00000593251 MUC3AQ02505 3323 aa20.56■□□□□ 0.88
RETREG3-212ENST00000593251 TCF20Q9UGU0 1960 aaKnown RBP20.55■□□□□ 0.88
RETREG3-212ENST00000593251 RPS6P62753 249 aaKnown RBP20.55■□□□□ 0.88
RETREG3-212ENST00000593251 PDE4DQ08499 809 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 ZNF543Q08ER8 600 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 FAM47CQ5HY64 1035 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 TBC1D10CQ8IV04 446 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 MTG1Q9BT17 334 aaPredicted RBP20.55■□□□□ 0.88
RETREG3-212ENST00000593251 CPVLQ9H3G5 476 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 THEGQ9P2T0 379 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 KIAA1217Q5T5P2 1943 aa20.55■□□□□ 0.88
RETREG3-212ENST00000593251 LOC102724159A0A0B4J2E5 919 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 GOLGA8HP0CJ92 632 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 PPP2R5BQ15173 497 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 PWP2Q15269 919 aaKnown RBP20.54■□□□□ 0.88
RETREG3-212ENST00000593251 NBPF20Q3BBV1 942 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 USH1GQ495M9 461 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 PPP2R2DQ66LE6 453 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 MFSD6Q6ZSS7 791 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 ZKSCAN3Q9BRR0 538 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 GPHNQ9NQX3 736 aaPredicted RBP20.54■□□□□ 0.88
RETREG3-212ENST00000593251 PTPRSQ13332 1948 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 TET1Q8NFU7 2136 aa20.54■□□□□ 0.88
RETREG3-212ENST00000593251 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 TNFRSF10AO00220 468 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 SUPT20HL2P0C7V6 817 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 ATXN2LQ8WWM7 1075 aaKnown RBP20.53■□□□□ 0.88
RETREG3-212ENST00000593251 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 TRANK1O15050 2925 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 NEDD4P46934 1319 aa20.53■□□□□ 0.88
RETREG3-212ENST00000593251 SNHG28P0DPA3 235 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 ATP2A2P16615 1042 aaKnown RBP20.52■□□□□ 0.88
RETREG3-212ENST00000593251 EDNRBP24530 442 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 CHMP4BP1P59074 171 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 MICALL1Q8N3F8 863 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms