RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GJA8P48165 433 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 TRAPPC10P48553 1259 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 TOB1P50616 345 aaPredicted RBP15.4■□□□□ 0.06
VMP1-217ENST00000593168 FBXO11Q86XK2 927 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
VMP1-217ENST00000593168 LINC00301Q8NCQ3 95 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 RAET1EQ8TD07 263 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 RANBP17Q9H2T7 1088 aaKnown RBP15.4■□□□□ 0.06
VMP1-217ENST00000593168 NOL7Q9UMY1 257 aaKnown RBP15.4■□□□□ 0.06
VMP1-217ENST00000593168 PCDHA6Q9UN73 950 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 KCNH4Q9UQ05 1017 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 PCDHA8Q9Y5H6 950 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 CLIC4Q9Y696 253 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
VMP1-217ENST00000593168 MYPNQ86TC9 1320 aa15.4■□□□□ 0.06
VMP1-217ENST00000593168 TRIM75PA6NK02 468 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 FDX1P10109 184 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 VCAM1P19320 739 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
VMP1-217ENST00000593168 CEBPZQ03701 1054 aaKnown RBP15.39■□□□□ 0.05
VMP1-217ENST00000593168 SLC39A14Q15043 492 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 KLHL40Q2TBA0 621 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 EARS2Q5JPH6 523 aaKnown RBP15.39■□□□□ 0.05
VMP1-217ENST00000593168 TEX2Q8IWB9 1127 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 SLF1Q9BQI6 1058 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 PRO3102Q9H379 93 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 RIC8AQ9NPQ8 531 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 TMOD4Q9NZQ9 345 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 PCDHA1Q9Y5I3 950 aa15.39■□□□□ 0.05
VMP1-217ENST00000593168 ADAMTS3O15072 1205 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 GADD45BO75293 160 aaPredicted RBP15.38■□□□□ 0.05
VMP1-217ENST00000593168 GJB1P08034 283 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 HOXD10P28358 340 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 ADCY7P51828 1080 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 PRKCZQ05513 592 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 STK38Q15208 465 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 PTPAQ15257 358 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 SF3A1Q15459 793 aaKnown RBP15.38■□□□□ 0.05
VMP1-217ENST00000593168 PIK3AP1Q6ZUJ8 805 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 KRT25Q7Z3Z0 450 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 KIFC2Q96AC6 838 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 FTOQ9C0B1 505 aaKnown RBP eCLIP15.38■□□□□ 0.05
VMP1-217ENST00000593168 RNF208Q9H0X6 261 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 RPAP3Q9H6T3 665 aaPredicted RBP15.38■□□□□ 0.05
VMP1-217ENST00000593168 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.38■□□□□ 0.05
VMP1-217ENST00000593168 FBXO28Q9NVF7 368 aa15.38■□□□□ 0.05
VMP1-217ENST00000593168 MORC2Q9Y6X9 1032 aaPredicted RBP15.38■□□□□ 0.05
VMP1-217ENST00000593168 PTPRFP10586 1907 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 CCDC194A0A1B0GVG4 234 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 CXCL11O14625 94 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 SPTLC2O15270 562 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 PPP6R2O75170 966 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 BCRP11274 1271 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 HMGCS2P54868 508 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 MCTP2Q6DN12 878 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
VMP1-217ENST00000593168 GPT2Q8TD30 523 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 CUL5Q93034 780 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 ANP32EQ9BTT0 268 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 HTATIP2Q9BUP3 242 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 PSTPIP2Q9H939 334 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 PNMA2Q9UL42 364 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 PPP1R9AQ9ULJ8 1098 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 GABRQQ9UN88 632 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 CEP131Q9UPN4 1083 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 ALPK3Q96L96 1907 aa15.37■□□□□ 0.05
VMP1-217ENST00000593168 GOLGA6L4A6NEF3 574 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 FAM205CA6NFA0 338 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 BMP15O95972 392 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 CYP2C8P10632 490 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 SNAP25P60880 206 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 RASGRP4Q8TDF6 673 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 PGBD1Q96JS3 809 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 TANGO6Q9C0B7 1094 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 UNC93B1Q9H1C4 597 aa15.36■□□□□ 0.05
VMP1-217ENST00000593168 BIN2Q9UBW5 565 aaPredicted RBP15.36■□□□□ 0.05
VMP1-217ENST00000593168 USP17L15C9J2P7 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L13C9JLJ4 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L11C9JVI0 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L18D6R9N7 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L22D6RA61 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L17D6RBQ6 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L19D6RCP7 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L20D6RJB6 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 FLOT1O75955 427 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
VMP1-217ENST00000593168 UBXN2AP68543 259 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 USP17L24Q0WX57 530 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
VMP1-217ENST00000593168 NONOQ15233 471 aaKnown RBP eCLIP15.35■□□□□ 0.05
VMP1-217ENST00000593168 TTC38Q5R3I4 469 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 ADALQ6DHV7 355 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 CATSPERGQ6ZRH7 1159 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
VMP1-217ENST00000593168 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 PCDHA7Q9UN72 937 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 ADAMTS5Q9UNA0 930 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 PCDHB6Q9Y5E3 794 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms