RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 CLEC4DQ8WXI8 215 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 RNPC3Q96LT9 517 aaKnown RBP18.9■□□□□ 0.62
CIRBP-241ENST00000593048 FAM161BQ96MY7 647 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 UBAC1Q9BSL1 405 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 CNNM2Q9H8M5 875 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 ZSWIM5Q9P217 1185 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 Q9Y3F1 56 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 WDR19Q8NEZ3 1342 aa18.9■□□□□ 0.62
CIRBP-241ENST00000593048 LAMA2P24043 3122 aaKnown RBP18.89■□□□□ 0.62
CIRBP-241ENST00000593048 LOC102724159A0A0B4J2E5 919 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 CTAGE5O15320 804 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 DHX16O60231 1041 aaKnown RBP18.89■□□□□ 0.61
CIRBP-241ENST00000593048 PDE4AP27815 886 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 PDE4DQ08499 809 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 PWP2Q15269 919 aaKnown RBP18.89■□□□□ 0.61
CIRBP-241ENST00000593048 TTC22Q5TAA0 569 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 CXCL17Q6UXB2 119 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 SLC30A10Q6XR72 485 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 RUFY2Q8WXA3 655 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 CPVLQ9H3G5 476 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 MCM3APO60318 1980 aa18.89■□□□□ 0.61
CIRBP-241ENST00000593048 B4DLN1 442 aa18.88■□□□□ 0.61
CIRBP-241ENST00000593048 PTGS1P23219 599 aa18.88■□□□□ 0.61
CIRBP-241ENST00000593048 MRPL12P52815 198 aaKnown RBP18.88■□□□□ 0.61
CIRBP-241ENST00000593048 RPS6P62753 249 aaKnown RBP18.88■□□□□ 0.61
CIRBP-241ENST00000593048 ASPRV1Q53RT3 343 aa18.88■□□□□ 0.61
CIRBP-241ENST00000593048 ENAHQ8N8S7 591 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-241ENST00000593048 ANKS1AQ92625 1134 aa18.88■□□□□ 0.61
CIRBP-241ENST00000593048 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
CIRBP-241ENST00000593048 TBX21Q9UL17 535 aa18.88■□□□□ 0.61
CIRBP-241ENST00000593048 TNKSO95271 1327 aa18.88■□□□□ 0.61
CIRBP-241ENST00000593048 PARP1P09874 1014 aaKnown RBP18.87■□□□□ 0.61
CIRBP-241ENST00000593048 GSPT1P15170 499 aaKnown RBP18.87■□□□□ 0.61
CIRBP-241ENST00000593048 EPHB4P54760 987 aa18.87■□□□□ 0.61
CIRBP-241ENST00000593048 TRDNQ13061 729 aa18.87■□□□□ 0.61
CIRBP-241ENST00000593048 ITGA7Q13683 1181 aa18.87■□□□□ 0.61
CIRBP-241ENST00000593048 CDC37Q16543 378 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-241ENST00000593048 DUSP28Q4G0W2 176 aa18.87■□□□□ 0.61
CIRBP-241ENST00000593048 IFIT1BQ5T764 474 aaKnown RBP18.87■□□□□ 0.61
CIRBP-241ENST00000593048 MFSD5Q6N075 450 aa18.87■□□□□ 0.61
CIRBP-241ENST00000593048 FAM126BQ8IXS8 530 aa18.87■□□□□ 0.61
CIRBP-241ENST00000593048 SMAD3P84022 425 aaKnown RBP18.86■□□□□ 0.61
CIRBP-241ENST00000593048 PPIGQ13427 754 aaKnown RBP eCLIP18.86■□□□□ 0.613e-9■■■□□ 14.7
CIRBP-241ENST00000593048 TMEM63BQ5T3F8 832 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 ADGRF4Q8IZF3 695 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 TMEM199Q8N511 208 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 DNERQ8NFT8 737 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 GUCD1Q96NT3 240 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 SEZ6LQ9BYH1 1024 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 PPP1R12CQ9BZL4 782 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 VAT1LQ9HCJ6 419 aa18.86■□□□□ 0.61
CIRBP-241ENST00000593048 ABCB11O95342 1321 aa18.85■□□□□ 0.61
CIRBP-241ENST00000593048 RAD50Q92878 1312 aa18.85■□□□□ 0.61
CIRBP-241ENST00000593048 BRDTQ58F21 947 aaPredicted RBP18.85■□□□□ 0.61
CIRBP-241ENST00000593048 RGS22Q8NE09 1264 aa18.85■□□□□ 0.61
CIRBP-241ENST00000593048 OR6J1Q8NGC5 347 aa18.85■□□□□ 0.61
CIRBP-241ENST00000593048 IL25Q9H293 177 aa18.85■□□□□ 0.61
CIRBP-241ENST00000593048 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
CIRBP-241ENST00000593048 CPT1AP50416 773 aa18.84■□□□□ 0.61
CIRBP-241ENST00000593048 PSMC6P62333 389 aa18.84■□□□□ 0.61
CIRBP-241ENST00000593048 PPP2R5BQ15173 497 aa18.84■□□□□ 0.61
CIRBP-241ENST00000593048 POLR3EQ9NVU0 708 aa18.84■□□□□ 0.61
CIRBP-241ENST00000593048 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
CIRBP-241ENST00000593048 NKRFO15226 690 aaKnown RBP eCLIP18.83■□□□□ 0.6
CIRBP-241ENST00000593048 CD4P01730 458 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 MYL3P08590 195 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 QRICH1Q2TAL8 776 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 FBXO11Q86XK2 927 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 MCF2L2Q86YR7 1114 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 SLC43A3Q8NBI5 491 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 SCFD2Q8WU76 684 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 SEMA6BQ9H3T3 888 aa18.83■□□□□ 0.6
CIRBP-241ENST00000593048 MRPL11Q9Y3B7 192 aaKnown RBP18.83■□□□□ 0.6
CIRBP-241ENST00000593048 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-241ENST00000593048 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-241ENST00000593048 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
CIRBP-241ENST00000593048 ERICH2A1L162 156 aa18.82■□□□□ 0.6
CIRBP-241ENST00000593048 CSF2RAP15509 400 aa18.82■□□□□ 0.6
CIRBP-241ENST00000593048 CHMLP26374 656 aa18.82■□□□□ 0.6
CIRBP-241ENST00000593048 CYP2C18P33260 490 aa18.82■□□□□ 0.6
CIRBP-241ENST00000593048 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.82■□□□□ 0.66e-8■■□□□ 11.6
CIRBP-241ENST00000593048 MAF1Q9H063 256 aa18.82■□□□□ 0.6
CIRBP-241ENST00000593048 HIPK3Q9H422 1215 aa18.82■□□□□ 0.6
CIRBP-241ENST00000593048 JMJD4Q9H9V9 463 aa18.82■□□□□ 0.6
CIRBP-241ENST00000593048 LAMA4Q16363 1823 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 GRIN2DO15399 1336 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 ACRP10323 421 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 TXNP10599 105 aaKnown RBP18.81■□□□□ 0.6
CIRBP-241ENST00000593048 EDNRBP24530 442 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 PTH1RQ03431 593 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 TTLL4Q14679 1199 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 CYB5R4Q7L1T6 521 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 RALYLQ86SE5 291 aaKnown RBP18.81■□□□□ 0.6
CIRBP-241ENST00000593048 NSUN6Q8TEA1 469 aaKnown RBP18.81■□□□□ 0.6
CIRBP-241ENST00000593048 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 COL25A1Q9BXS0 654 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-241ENST00000593048 TRPV6Q9H1D0 765 aa18.81■□□□□ 0.6
CIRBP-241ENST00000593048 EYSQ5T1H1 3165 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms