RNA–Protein interactions for RNA: ENST00000592326.1

USP36-223, Transcript of ubiquitin specific peptidase 36, human

TSL 5

Gene USP36, Length 406 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP36-223	ENST00000592326	POLR3E	Q9NVU0	708 aa		13.3	□□□□□ -0.28
USP36-223	ENST00000592326	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.3	□□□□□ -0.28
USP36-223	ENST00000592326	ANAPC4	Q9UJX5	808 aa		13.3	□□□□□ -0.28
USP36-223	ENST00000592326	SLC4A7	Q9Y6M7	1214 aa		13.3	□□□□□ -0.28
USP36-223	ENST00000592326	MYH4	Q9Y623	1939 aa		13.3	□□□□□ -0.28
USP36-223	ENST00000592326	ORC4	O43929	436 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	SUPT20HL2	P0C7V6	817 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	PDE4D	Q08499	809 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	DUSP28	Q4G0W2	176 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	MCMDC2	Q4G0Z9	681 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	FAM47C	Q5HY64	1035 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	RNF207	Q6ZRF8	634 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	SMC5	Q8IY18	1101 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	IL27	Q8NEV9	243 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	OR6J1	Q8NGC5	347 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	SCLY	Q96I15	445 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	TMEM47	Q9BQJ4	181 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	NOC4L	Q9BVI4	516 aa	Known RBP	13.29	□□□□□ -0.28
USP36-223	ENST00000592326	PRDM6	Q9NQX0	595 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	GRIN2D	O15399	1336 aa		13.29	□□□□□ -0.28
USP36-223	ENST00000592326	TRIM6-TRIM34	B2RNG4	842 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	NFIB	O00712	420 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	FOXP2	O15409	715 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	FGA	P02671	866 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	CPT1A	P50416	773 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	RABGGTB	P53611	331 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	CHMP4BP1	P59074	171 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	HAND2	P61296	217 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	ALX1	Q15699	326 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	BTNL9	Q6UXG8	535 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	MFSD6	Q6ZSS7	791 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	MICALL1	Q8N3F8	863 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.28	□□□□□ -0.28
USP36-223	ENST00000592326	PNMA2	Q9UL42	364 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326	LAMA3	Q16787	3333 aa		13.28	□□□□□ -0.28
USP36-223	ENST00000592326		B4DLN1	442 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	CYP2C9	P11712	490 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	MRPL12	P52815	198 aa	Known RBP	13.27	□□□□□ -0.29
USP36-223	ENST00000592326	PDE1A	P54750	535 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	AKNAD1	Q5T1N1	836 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	PPP2R2D	Q66LE6	453 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	B4GALNT3	Q6L9W6	998 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.27	□□□□□ -0.29
USP36-223	ENST00000592326	DEFB128	Q7Z7B8	93 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	RETREG2	Q8NC44	543 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	MORC4	Q8TE76	937 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	RILPL2	Q969X0	211 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	FAM227B	Q96M60	508 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	MTG1	Q9BT17	334 aa	Predicted RBP	13.27	□□□□□ -0.29
USP36-223	ENST00000592326	WNT8A	Q9H1J5	351 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.27	□□□□□ -0.29
USP36-223	ENST00000592326	TCP11L1	Q9NUJ3	509 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	TRMT13	Q9NUP7	481 aa	Known RBP	13.27	□□□□□ -0.29
USP36-223	ENST00000592326	THEG	Q9P2T0	379 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326	YBX2	Q9Y2T7	364 aa	Known RBP	13.27	□□□□□ -0.29
USP36-223	ENST00000592326	RAD50	Q92878	1312 aa		13.27	□□□□□ -0.29
USP36-223	ENST00000592326		A0A0D9SFI3	127 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	TNFRSF10A	O00220	468 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	TNKS	O95271	1327 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	FGR	P09769	529 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	HSPD1	P10809	573 aa	Known RBP	13.26	□□□□□ -0.29
USP36-223	ENST00000592326	ACTN1	P12814	892 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	NOV	P48745	357 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	NMI	Q13287	307 aa	Predicted RBP	13.26	□□□□□ -0.29
USP36-223	ENST00000592326	PPP2R5B	Q15173	497 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	SLC30A10	Q6XR72	485 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.26	□□□□□ -0.29
USP36-223	ENST00000592326	NOD1	Q9Y239	953 aa		13.26	□□□□□ -0.29
USP36-223	ENST00000592326	LOC102724159	A0A0B4J2E5	919 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	NKRF	O15226	690 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	PFKM	P08237	780 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	TXN	P10599	105 aa	Known RBP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	PDHB	P11177	359 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	MYOG	P15173	224 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	ATP2A2	P16615	1042 aa	Known RBP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	RPS6	P62753	249 aa	Known RBP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	PURA	Q00577	322 aa	Known RBP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	ADGRE1	Q14246	886 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	PWP2	Q15269	919 aa	Known RBP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	SKIV2L	Q15477	1246 aa	Known RBP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	USH1G	Q495M9	461 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	PPP1R13L	Q8WUF5	828 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	TTC14	Q96N46	770 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	ZKSCAN3	Q9BRR0	538 aa		13.25	□□□□□ -0.29
USP36-223	ENST00000592326	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	RNF41	Q9H4P4	317 aa	Predicted RBP	13.25	□□□□□ -0.29
USP36-223	ENST00000592326	SALL3	Q9BXA9	1300 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	RBM47	A0AV96	593 aa	Known RBP	13.24	□□□□□ -0.29
USP36-223	ENST00000592326	DHX16	O60231	1041 aa	Known RBP	13.24	□□□□□ -0.29
USP36-223	ENST00000592326	KPNA6	O60684	536 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	GOLGA8H	P0CJ92	632 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	MFAP1	P55081	439 aa	Known RBP	13.24	□□□□□ -0.29
USP36-223	ENST00000592326	MRPS5	P82675	430 aa	Known RBP	13.24	□□□□□ -0.29
USP36-223	ENST00000592326	ZNF543	Q08ER8	600 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	TTLL4	Q14679	1199 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	NBPF20	Q3BBV1	942 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	SCFD2	Q8WU76	684 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	CLEC4D	Q8WXI8	215 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	ESR2	Q92731	530 aa		13.24	□□□□□ -0.29
USP36-223	ENST00000592326	COPS5	Q92905	334 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms