RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 NOL8Q76FK4 1167 aaKnown RBP16.54■□□□□ 0.24
CALR-207ENST00000590325 MSL3Q8N5Y2 521 aaKnown RBP16.54■□□□□ 0.24
CALR-207ENST00000590325 SYTL5Q8TDW5 730 aaPredicted RBP16.54■□□□□ 0.24
CALR-207ENST00000590325 PHKBQ93100 1093 aa16.54■□□□□ 0.24
CALR-207ENST00000590325 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
CALR-207ENST00000590325 SLKQ9H2G2 1235 aaPredicted RBP16.54■□□□□ 0.24
CALR-207ENST00000590325 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
CALR-207ENST00000590325 PRPF3O43395 683 aaKnown RBP16.53■□□□□ 0.24
CALR-207ENST00000590325 LARGE1O95461 756 aa16.53■□□□□ 0.24
CALR-207ENST00000590325 CCL5P13501 91 aa16.53■□□□□ 0.24
CALR-207ENST00000590325 HSD17B4P51659 736 aa16.53■□□□□ 0.24
CALR-207ENST00000590325 WWC2Q6AWC2 1192 aa16.53■□□□□ 0.24
CALR-207ENST00000590325 HEATR3Q7Z4Q2 680 aa16.53■□□□□ 0.24
CALR-207ENST00000590325 GPKOWQ92917 476 aaPredicted RBP eCLIP16.53■□□□□ 0.241e-14■■□□□ 12.5
CALR-207ENST00000590325 SYNGAP1Q96PV0 1343 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 CPLX1O14810 134 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 PPFIA3O75145 1194 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 CFBP00751 764 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 PKN1Q16512 942 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 PFKFB3Q16875 520 aaPredicted RBP16.52■□□□□ 0.24
CALR-207ENST00000590325 SAMD3Q8N6K7 520 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 NECAB1Q8N987 351 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 TRPV1Q8NER1 839 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 SLC26A6Q9BXS9 759 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 RNF26Q9BY78 433 aaPredicted RBP16.52■□□□□ 0.24
CALR-207ENST00000590325 RNF208Q9H0X6 261 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 HMX1Q9NP08 348 aaPredicted RBP16.52■□□□□ 0.24
CALR-207ENST00000590325 MAP3K20Q9NYL2 800 aaKnown RBP16.52■□□□□ 0.24
CALR-207ENST00000590325 COL20A1Q9P218 1284 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
CALR-207ENST00000590325 LIMCH1Q9UPQ0 1083 aa16.52■□□□□ 0.24
CALR-207ENST00000590325 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.23
CALR-207ENST00000590325 RPTORQ8N122 1335 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 SNAI1O95863 264 aaPredicted RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 CYBAP13498 195 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 SCG2P13521 617 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 HOXA13P31271 388 aaPredicted RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 PRAMEF19Q5SWL8 479 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 CPLX2Q6PUV4 134 aaKnown RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.51■□□□□ 0.236e-9■□□□□ 9.9
CALR-207ENST00000590325 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 PAK6Q9NQU5 681 aaPredicted RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 BARHL2Q9NY43 387 aa16.51■□□□□ 0.23
CALR-207ENST00000590325 RBM27Q9P2N5 1060 aaKnown RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
CALR-207ENST00000590325 ASB14A6NK59 587 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 STXBP3O00186 592 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 ALDH5A1P51649 535 aaPredicted RBP16.5■□□□□ 0.23
CALR-207ENST00000590325 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
CALR-207ENST00000590325 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
CALR-207ENST00000590325 TRIM22Q8IYM9 498 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
CALR-207ENST00000590325 IL27Q8NEV9 243 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 DNERQ8NFT8 737 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 MORC4Q8TE76 937 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 TMEM106CQ9BVX2 250 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
CALR-207ENST00000590325 LOC102724159A0A0B4J2E5 919 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 PIK3CDO00329 1044 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 MEIS2O14770 477 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 ST18O60284 1047 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 CDKL5O76039 1030 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 CTDNEP1O95476 244 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 GJB1P08034 283 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 ZNF865P0CJ78 1059 aaPredicted RBP16.49■□□□□ 0.23
CALR-207ENST00000590325 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 PWP2Q15269 919 aaKnown RBP16.49■□□□□ 0.23
CALR-207ENST00000590325 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 NSUN6Q8TEA1 469 aaKnown RBP16.49■□□□□ 0.23
CALR-207ENST00000590325 RMDN3Q96TC7 470 aa16.49■□□□□ 0.23
CALR-207ENST00000590325 MKI67P46013 3256 aaKnown RBP16.49■□□□□ 0.23
CALR-207ENST00000590325 POTEFA5A3E0 1075 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 EDNRBP24530 442 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 NAPAP54920 295 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 SOX10P56693 466 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 ACVR2BQ13705 512 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
CALR-207ENST00000590325 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 KATNBL1Q9H079 304 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
CALR-207ENST00000590325 SEPT4O43236 478 aa16.47■□□□□ 0.23
CALR-207ENST00000590325 DTNBO60941 627 aa16.47■□□□□ 0.23
CALR-207ENST00000590325 CD2BP2O95400 341 aaKnown RBP16.47■□□□□ 0.23
CALR-207ENST00000590325 DEXIO95424 95 aa16.47■□□□□ 0.23
CALR-207ENST00000590325 CNGA1P29973 690 aa16.47■□□□□ 0.23
CALR-207ENST00000590325 GJA8P48165 433 aa16.47■□□□□ 0.23
CALR-207ENST00000590325 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
CALR-207ENST00000590325 FCHSD1Q86WN1 690 aa16.47■□□□□ 0.23
CALR-207ENST00000590325 CUL5Q93034 780 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms