RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
SCAMP4-212ENST00000590266 ABHD16BQ9H3Z7 469 aa16.28■□□□□ 0.2
SCAMP4-212ENST00000590266 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
SCAMP4-212ENST00000590266 PNMA6FA0A0J9YX94 578 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 PGK1P00558 417 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 GNAQP50148 359 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 CCDC144BQ3MJ40 725 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 SGMS1Q86VZ5 419 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 SRBD1Q8N5C6 995 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 ARRDC4Q8NCT1 418 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 BRF1Q92994 677 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 MTMR8Q96EF0 704 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 SEC63Q9UGP8 760 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 COLQQ9Y215 455 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 MKI67P46013 3256 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-212ENST00000590266 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 GOLGA8AA7E2F4 631 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 GOLGA8BA8MQT2 603 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 ZBTB43O43298 467 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 EVI5O60447 810 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 PDE4DQ08499 809 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 APOBRQ0VD83 1088 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 LZTS2Q9BRK4 669 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 SENP6Q9GZR1 1112 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-212ENST00000590266 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 DNM1LO00429 736 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 HOXA13P31271 388 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 LRRC41Q15345 812 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 RTN1Q16799 776 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 TMTC3Q6ZXV5 915 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 SYTL5Q8TDW5 730 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 TAAR1Q96RJ0 339 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 MPHOSPH6Q99547 160 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 PDGFCQ9NRA1 345 aa16.25■□□□□ 0.19
SCAMP4-212ENST00000590266 ADCY6O43306 1168 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 ATN1P54259 1190 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 TNFAIP2Q03169 654 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 TRAF1Q13077 416 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 RNF180Q86T96 592 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 RGS22Q8NE09 1264 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 UPF3BQ9BZI7 483 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 KATNBL1Q9H079 304 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 RBM28Q9NW13 759 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 COL20A1Q9P218 1284 aa16.24■□□□□ 0.19
SCAMP4-212ENST00000590266 SYNRGQ9UMZ2 1314 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 OPLAHO14841 1288 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 C6orf222P0C671 652 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 EIF2AK2P19525 551 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 PTGS1P23219 599 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 METAP2P50579 478 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 IRX5P78411 483 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 C7orf61Q8IZ16 206 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 RMDN3Q96TC7 470 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 SPC25Q9HBM1 224 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 VTA1Q9NP79 307 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
SCAMP4-212ENST00000590266 MYADML2A6NDP7 307 aa16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 B4DLN1 442 aa16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 DUSP11O75319 330 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 COL6A1P12109 1028 aa16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 HEATR3Q7Z4Q2 680 aa16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 NSUN6Q8TEA1 469 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 LARP6Q9BRS8 491 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-212ENST00000590266 SMPD1P17405 629 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 CDC27P30260 824 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 HSD17B4P51659 736 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 LRRC26Q2I0M4 334 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 TMEM63BQ5T3F8 832 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 TAPT1Q6NXT6 567 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 MORC4Q8TE76 937 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 GPKOWQ92917 476 aaPredicted RBP eCLIP16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 ZSWIM6Q9HCJ5 1215 aa16.21■□□□□ 0.19
SCAMP4-212ENST00000590266 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 DYNC1LI2O43237 492 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 PPFIA3O75145 1194 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 ADAMTS4O75173 837 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 SEC24BO95487 1268 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 MYCLP12524 364 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 ADD1P35611 737 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 BEX3Q00994 111 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 KCNA10Q16322 511 aa16.2■□□□□ 0.18
SCAMP4-212ENST00000590266 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms