RNA–Protein interactions for RNA: ENST00000589871.1

RBM42-205, Transcript of RNA binding motif protein 42, human

TSL 5 BASIC

Gene RBM42, Length 1,487 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM42-205	ENST00000589871	RAB11FIP4	Q86YS3	637 aa		27.92	■■■□□ 2.06
RBM42-205	ENST00000589871	C11orf49	Q9H6J7	331 aa		27.92	■■■□□ 2.06
RBM42-205	ENST00000589871	DNM1L	O00429	736 aa		27.91	■■■□□ 2.06
RBM42-205	ENST00000589871	CAST	P20810	708 aa	Known RBP	27.91	■■■□□ 2.06
RBM42-205	ENST00000589871	DNER	Q8NFT8	737 aa		27.91	■■■□□ 2.06
RBM42-205	ENST00000589871	RRP36	Q96EU6	259 aa	Known RBP	27.91	■■■□□ 2.06
RBM42-205	ENST00000589871	KATNBL1	Q9H079	304 aa		27.91	■■■□□ 2.06
RBM42-205	ENST00000589871	XPNPEP3	Q9NQH7	507 aa		27.91	■■■□□ 2.06
RBM42-205	ENST00000589871	DNAH12	Q6ZR08	3092 aa		27.91	■■■□□ 2.06
RBM42-205	ENST00000589871	PLEKHA8P1	O95397	391 aa		27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	CCDC144B	Q3MJ40	725 aa		27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	MORC4	Q8TE76	937 aa		27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	PIBF1	Q8WXW3	757 aa		27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	TBC1D5	Q92609	795 aa		27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	DPF3	Q92784	378 aa		27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	MPHOSPH6	Q99547	160 aa	Known RBP	27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	BRPF3	Q9ULD4	1205 aa		27.9	■■■□□ 2.06
RBM42-205	ENST00000589871	ZBTB43	O43298	467 aa		27.89	■■■□□ 2.06
RBM42-205	ENST00000589871	RPS6KB1	P23443	525 aa		27.89	■■■□□ 2.06
RBM42-205	ENST00000589871	GJC2	Q5T442	439 aa	Predicted RBP	27.89	■■■□□ 2.06
RBM42-205	ENST00000589871		Q6ZUG5	572 aa		27.89	■■■□□ 2.06
RBM42-205	ENST00000589871	SRBD1	Q8N5C6	995 aa	Known RBP	27.89	■■■□□ 2.06
RBM42-205	ENST00000589871	SEC63	Q9UGP8	760 aa	Known RBP	27.89	■■■□□ 2.06
RBM42-205	ENST00000589871	DDX49	Q9Y6V7	483 aa	Known RBP	27.89	■■■□□ 2.06
RBM42-205	ENST00000589871	LRRC37A2	A6NM11	1700 aa		27.89	■■■□□ 2.06
RBM42-205	ENST00000589871	KLF18	A0A0U1RQI7	1052 aa		27.89	■■■□□ 2.05
RBM42-205	ENST00000589871	EIF5B	O60841	1220 aa	Known RBP	27.89	■■■□□ 2.05
RBM42-205	ENST00000589871	CFB	P00751	764 aa		27.89	■■■□□ 2.05
RBM42-205	ENST00000589871	MYCN	P04198	464 aa	Predicted RBP	27.89	■■■□□ 2.05
RBM42-205	ENST00000589871	COL6A1	P12109	1028 aa		27.89	■■■□□ 2.05
RBM42-205	ENST00000589871	CMTR1	Q8N1G2	835 aa	Known RBP	27.89	■■■□□ 2.05
RBM42-205	ENST00000589871	RBM28	Q9NW13	759 aa	Known RBP	27.89	■■■□□ 2.05
RBM42-205	ENST00000589871		B4DLN1	442 aa		27.88	■■■□□ 2.05
RBM42-205	ENST00000589871	KBTBD13	C9JR72	458 aa		27.88	■■■□□ 2.05
RBM42-205	ENST00000589871	MRPL12	P52815	198 aa	Known RBP	27.88	■■■□□ 2.05
RBM42-205	ENST00000589871	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.88	■■■□□ 2.05
RBM42-205	ENST00000589871	LENG1	Q96BZ8	264 aa	Predicted RBP	27.88	■■■□□ 2.05
RBM42-205	ENST00000589871	OPLAH	O14841	1288 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	DUSP11	O75319	330 aa	Known RBP	27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	RCAN1	P53805	252 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	LRRC41	Q15345	812 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	TMTC3	Q6ZXV5	915 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	EEPD1	Q7L9B9	569 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	RNF180	Q86T96	592 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	FBXL16	Q8N461	479 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	VTA1	Q9NP79	307 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	MAP3K20	Q9NYL2	800 aa	Known RBP	27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	CEP290	O15078	2479 aa		27.87	■■■□□ 2.05
RBM42-205	ENST00000589871	PGK1	P00558	417 aa		27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	PDE4D	Q08499	809 aa		27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	RTN1	Q16799	776 aa		27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	RUFY3	Q7L099	469 aa		27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	FBXO16	Q8IX29	292 aa	Predicted RBP	27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	CCDC82	Q8N4S0	544 aa		27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	SAMD3	Q8N6K7	520 aa		27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	BRF1	Q92994	677 aa		27.86	■■■□□ 2.05
RBM42-205	ENST00000589871	HSD17B4	P51659	736 aa		27.85	■■■□□ 2.05
RBM42-205	ENST00000589871	GHRHR	Q02643	423 aa		27.85	■■■□□ 2.05
RBM42-205	ENST00000589871	TM6SF1	Q9BZW5	370 aa		27.85	■■■□□ 2.05
RBM42-205	ENST00000589871	SENP6	Q9GZR1	1112 aa	Predicted RBP	27.85	■■■□□ 2.05
RBM42-205	ENST00000589871	ZSWIM6	Q9HCJ5	1215 aa		27.85	■■■□□ 2.05
RBM42-205	ENST00000589871	COL20A1	Q9P218	1284 aa		27.85	■■■□□ 2.05
RBM42-205	ENST00000589871	GOLGA8A	A7E2F4	631 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	GOLGA8B	A8MQT2	603 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	ADCY6	O43306	1168 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	EDNRB	P24530	442 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	TNFAIP2	Q03169	654 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	APOBR	Q0VD83	1088 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	PRPF38B	Q5VTL8	546 aa	Known RBP	27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	NSUN6	Q8TEA1	469 aa	Known RBP	27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	TAAR1	Q96RJ0	339 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	RMDN3	Q96TC7	470 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	AGXT2	Q9BYV1	514 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	CYP46A1	Q9Y6A2	500 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	ALPK3	Q96L96	1907 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	SYNRG	Q9UMZ2	1314 aa		27.84	■■■□□ 2.05
RBM42-205	ENST00000589871	EVI5	O60447	810 aa		27.83	■■■□□ 2.05
RBM42-205	ENST00000589871	ADCYAP1R1	P41586	468 aa		27.83	■■■□□ 2.05
RBM42-205	ENST00000589871	PPP2R5B	Q15173	497 aa		27.83	■■■□□ 2.05
RBM42-205	ENST00000589871	TAPT1	Q6NXT6	567 aa		27.83	■■■□□ 2.05
RBM42-205	ENST00000589871	SPC25	Q9HBM1	224 aa		27.83	■■■□□ 2.05
RBM42-205	ENST00000589871	ADAMTS4	O75173	837 aa		27.83	■■■□□ 2.04
RBM42-205	ENST00000589871	IQSEC1	Q6DN90	963 aa		27.83	■■■□□ 2.04
RBM42-205	ENST00000589871	NOL8	Q76FK4	1167 aa	Known RBP	27.83	■■■□□ 2.04
RBM42-205	ENST00000589871	PDGFC	Q9NRA1	345 aa		27.83	■■■□□ 2.04
RBM42-205	ENST00000589871	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.82	■■■□□ 2.04
RBM42-205	ENST00000589871	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.82	■■■□□ 2.04
RBM42-205	ENST00000589871	POLR2M	P0CAP2	368 aa		27.82	■■■□□ 2.04
RBM42-205	ENST00000589871	METAP2	P50579	478 aa	Known RBP eCLIP	27.82	■■■□□ 2.04	5e-7	■■■□□ 16.2
RBM42-205	ENST00000589871	ARHGEF16	Q5VV41	709 aa		27.82	■■■□□ 2.04
RBM42-205	ENST00000589871	IWS1	Q96ST2	819 aa		27.82	■■■□□ 2.04
RBM42-205	ENST00000589871	NR2E3	Q9Y5X4	410 aa		27.82	■■■□□ 2.04
RBM42-205	ENST00000589871	CCDC196	A0A1B0GTZ2	297 aa		27.81	■■■□□ 2.04
RBM42-205	ENST00000589871	HOXA13	P31271	388 aa	Predicted RBP	27.81	■■■□□ 2.04
RBM42-205	ENST00000589871	C6orf222	P0C671	652 aa	Predicted RBP	27.8	■■■□□ 2.04
RBM42-205	ENST00000589871	GJA9	P57773	515 aa		27.8	■■■□□ 2.04
RBM42-205	ENST00000589871	UPF3B	Q9BZI7	483 aa	Known RBP	27.8	■■■□□ 2.04
RBM42-205	ENST00000589871	PXMP2	Q9NR77	195 aa		27.8	■■■□□ 2.04
RBM42-205	ENST00000589871	CNTNAP5	Q8WYK1	1306 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms