RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 SNAP25P60880 206 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 DEFB103AP81534 67 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 NBPF20Q3BBV1 942 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 MUM1L1Q5H9M0 696 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 POTEBQ6S5H4 581 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 KIAA1211Q6ZU35 1233 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 LRRC47Q8N1G4 583 aaKnown RBP9.53□□□□□ -0.88
VAT1-207ENST00000589828 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 RNF25Q96BH1 459 aaPredicted RBP9.53□□□□□ -0.88
VAT1-207ENST00000589828 FTOQ9C0B1 505 aaKnown RBP eCLIP9.53□□□□□ -0.88
VAT1-207ENST00000589828 PUS7LQ9H0K6 701 aaKnown RBP9.53□□□□□ -0.88
VAT1-207ENST00000589828 BOLA2Q9H3K6 86 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 ACAD9Q9H845 621 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 RNF146Q9NTX7 359 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 LMCD1Q9NZU5 365 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
VAT1-207ENST00000589828 FEM1BQ9UK73 627 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
VAT1-207ENST00000589828 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 MYL3P08590 195 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 WDR5P61964 334 aaKnown RBP9.52□□□□□ -0.89
VAT1-207ENST00000589828 DUSP28Q4G0W2 176 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 PTCRAQ6ISU1 281 aaPredicted RBP9.52□□□□□ -0.89
VAT1-207ENST00000589828 MORC4Q8TE76 937 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 MKL1Q969V6 931 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 CHMP4CQ96CF2 233 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 CEP95Q96GE4 821 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 CTAGE1Q96RT6 745 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 MTUS1Q9ULD2 1270 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 PCDHB13Q9Y5F0 798 aa9.52□□□□□ -0.89
VAT1-207ENST00000589828 LINC01553A4QN01 128 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 TMEM232C9JQI7 657 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
VAT1-207ENST00000589828 DCXO43602 365 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 PRDM1O75626 825 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 BMP3P12645 472 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 ALAS1P13196 640 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 ALADP13716 330 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 ERVK-21P61565 698 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 SBK1Q52WX2 424 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 FAM47CQ5HY64 1035 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 ZKSCAN2Q63HK3 967 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 SLFN13Q68D06 897 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 ERC1Q8IUD2 1116 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 AMOTL1Q8IY63 956 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
VAT1-207ENST00000589828 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 POLR3EQ9NVU0 708 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 MTMR4Q9NYA4 1195 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 CYP39A1Q9NYL5 469 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
VAT1-207ENST00000589828 RBM47A0AV96 593 aaKnown RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 GSG1L2A8MUP6 293 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 H3BQ06 376 aaPredicted RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 BAIAP3O94812 1187 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 UBE3CQ15386 1083 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 RASGRP2Q7LDG7 609 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 ITPRIPQ8IWB1 547 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 RPAP2Q8IXW5 612 aaPredicted RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 GMCL1P1Q8NEA9 526 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 NEK9Q8TD19 979 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 DHX38Q92620 1227 aaKnown RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 COPS5Q92905 334 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 TGS1Q96RS0 853 aaKnown RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 STRBPQ96SI9 672 aaKnown RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 WDR11Q9BZH6 1224 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 KCNH6Q9H252 994 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
VAT1-207ENST00000589828 EPB41L4AQ9HCS5 686 aaPredicted RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
VAT1-207ENST00000589828 MINDY4BA8MYZ0 360 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 NBNO60934 754 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 GJB5O95377 273 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 IFIT2P09913 472 aaKnown RBP9.49□□□□□ -0.89
VAT1-207ENST00000589828 FDX1P10109 184 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 KCNJ6P48051 423 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 TKFCQ3LXA3 575 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 NFRKBQ6P4R8 1299 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 NSMFQ6X4W1 530 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 CLASRPQ8N2M8 674 aaKnown RBP9.49□□□□□ -0.89
VAT1-207ENST00000589828 OR6J1Q8NGC5 347 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 STAG1Q8WVM7 1258 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 RAD9AQ99638 391 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 HAUS7Q99871 368 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 C17orf80Q9BSJ5 609 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 ZBED2Q9BTP6 218 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 MCM3APO60318 1980 aa9.49□□□□□ -0.89
VAT1-207ENST00000589828 TTLL1O95922 423 aa9.48□□□□□ -0.89
VAT1-207ENST00000589828 CXCL10P02778 98 aa9.48□□□□□ -0.89
VAT1-207ENST00000589828 ATP5JP18859 108 aa9.48□□□□□ -0.89
VAT1-207ENST00000589828 MCCP23508 829 aa9.48□□□□□ -0.89
VAT1-207ENST00000589828 CPT1AP50416 773 aa9.48□□□□□ -0.89
VAT1-207ENST00000589828 ALDH5A1P51649 535 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms