RNA–Protein interactions for RNA: ENST00000589559.5

RBM42-204, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,328 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-204ENST00000589559 HTATIP2Q9BUP3 242 aa23.27■■□□□ 1.32
RBM42-204ENST00000589559 SOWAHBA6NEL2 793 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 GOLGA8AA7E2F4 631 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 SNAI1O95863 264 aaPredicted RBP23.26■■□□□ 1.31
RBM42-204ENST00000589559 METAP2P50579 478 aaKnown RBP eCLIP23.26■■□□□ 1.315e-7■■■□□ 16.2
RBM42-204ENST00000589559 EVCP57679 992 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 SRBD1Q8N5C6 995 aaKnown RBP23.26■■□□□ 1.31
RBM42-204ENST00000589559 MORC4Q8TE76 937 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 NSUN6Q8TEA1 469 aaKnown RBP23.26■■□□□ 1.31
RBM42-204ENST00000589559 IWS1Q96ST2 819 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 SPC25Q9HBM1 224 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
RBM42-204ENST00000589559 hCG_1984214I3L0E3 225 aa23.25■■□□□ 1.31
RBM42-204ENST00000589559 FARP2O94887 1054 aaPredicted RBP23.25■■□□□ 1.31
RBM42-204ENST00000589559 ZNF865P0CJ78 1059 aaPredicted RBP23.25■■□□□ 1.31
RBM42-204ENST00000589559 ALDH5A1P51649 535 aaPredicted RBP23.25■■□□□ 1.31
RBM42-204ENST00000589559 GHRHRQ02643 423 aa23.25■■□□□ 1.31
RBM42-204ENST00000589559 PRAMEF19Q5SWL8 479 aa23.25■■□□□ 1.31
RBM42-204ENST00000589559 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
RBM42-204ENST00000589559 IL27Q8NEV9 243 aa23.25■■□□□ 1.31
RBM42-204ENST00000589559 VTA1Q9NP79 307 aa23.25■■□□□ 1.31
RBM42-204ENST00000589559 PDRG1Q9NUG6 133 aa23.25■■□□□ 1.31
RBM42-204ENST00000589559 GCOM1H8Y6P7 765 aaPredicted RBP23.24■■□□□ 1.31
RBM42-204ENST00000589559 CFBP00751 764 aa23.24■■□□□ 1.31
RBM42-204ENST00000589559 POLR2MP0CAP2 368 aa23.24■■□□□ 1.31
RBM42-204ENST00000589559 RXRAP19793 462 aa23.24■■□□□ 1.31
RBM42-204ENST00000589559 IQSEC1Q6DN90 963 aa23.24■■□□□ 1.31
RBM42-204ENST00000589559 TRPV1Q8NER1 839 aa23.24■■□□□ 1.31
RBM42-204ENST00000589559 CUL5Q93034 780 aa23.24■■□□□ 1.31
RBM42-204ENST00000589559 SHISA4Q96DD7 197 aa23.24■■□□□ 1.31
RBM42-204ENST00000589559 ZNF274Q96GC6 653 aaPredicted RBP23.24■■□□□ 1.31
RBM42-204ENST00000589559 ALDH8A1Q9H2A2 487 aaPredicted RBP23.24■■□□□ 1.31
RBM42-204ENST00000589559 UPF2Q9HAU5 1272 aaKnown RBP23.24■■□□□ 1.31
RBM42-204ENST00000589559 ZHX1Q9UKY1 873 aaPredicted RBP23.24■■□□□ 1.31
RBM42-204ENST00000589559 MKI67P46013 3256 aaKnown RBP23.23■■□□□ 1.31
RBM42-204ENST00000589559 SMCHD1A6NHR9 2005 aa23.23■■□□□ 1.31
RBM42-204ENST00000589559 CPA1P15085 419 aa23.23■■□□□ 1.31
RBM42-204ENST00000589559 PDE4DQ08499 809 aa23.23■■□□□ 1.31
RBM42-204ENST00000589559 APOBRQ0VD83 1088 aa23.23■■□□□ 1.31
RBM42-204ENST00000589559 COL9A3Q14050 684 aaPredicted RBP23.23■■□□□ 1.31
RBM42-204ENST00000589559 CPLX2Q6PUV4 134 aaKnown RBP23.23■■□□□ 1.31
RBM42-204ENST00000589559 RNF180Q86T96 592 aa23.23■■□□□ 1.31
RBM42-204ENST00000589559 IL17RAQ96F46 866 aa23.23■■□□□ 1.31
RBM42-204ENST00000589559 FGD4Q96M96 766 aa23.23■■□□□ 1.31
RBM42-204ENST00000589559 DUSP11O75319 330 aaKnown RBP23.22■■□□□ 1.31
RBM42-204ENST00000589559 PLEKHA8P1O95397 391 aa23.22■■□□□ 1.31
RBM42-204ENST00000589559 HSD17B4P51659 736 aa23.22■■□□□ 1.31
RBM42-204ENST00000589559 AKAP17AQ02040 695 aaKnown RBP23.22■■□□□ 1.31
RBM42-204ENST00000589559 SLC30A10Q6XR72 485 aa23.22■■□□□ 1.31
RBM42-204ENST00000589559 SYTL5Q8TDW5 730 aaPredicted RBP23.22■■□□□ 1.31
RBM42-204ENST00000589559 GLT8D2Q9H1C3 349 aa23.22■■□□□ 1.31
RBM42-204ENST00000589559 KBTBD13C9JR72 458 aa23.21■■□□□ 1.31
RBM42-204ENST00000589559 DNM1LO00429 736 aa23.21■■□□□ 1.31
RBM42-204ENST00000589559 ARHGEF16Q5VV41 709 aa23.21■■□□□ 1.31
RBM42-204ENST00000589559 CCDC82Q8N4S0 544 aa23.21■■□□□ 1.31
RBM42-204ENST00000589559 RMDN3Q96TC7 470 aa23.21■■□□□ 1.31
RBM42-204ENST00000589559 XPNPEP3Q9NQH7 507 aa23.21■■□□□ 1.31
RBM42-204ENST00000589559 Q9Y3F1 56 aa23.21■■□□□ 1.31
RBM42-204ENST00000589559 BAZ2BQ9UIF8 2168 aaKnown RBP23.21■■□□□ 1.31
RBM42-204ENST00000589559 PPP1R11O60927 126 aaPredicted RBP23.2■■□□□ 1.3
RBM42-204ENST00000589559 STXBP2Q15833 593 aa23.2■■□□□ 1.3
RBM42-204ENST00000589559 SLC35G1Q2M3R5 365 aa23.2■■□□□ 1.3
RBM42-204ENST00000589559 CCDC144BQ3MJ40 725 aa23.2■■□□□ 1.3
RBM42-204ENST00000589559 PIBF1Q8WXW3 757 aa23.2■■□□□ 1.3
RBM42-204ENST00000589559 C11orf49Q9H6J7 331 aa23.2■■□□□ 1.3
RBM42-204ENST00000589559 NID2Q14112 1375 aa23.2■■□□□ 1.3
RBM42-204ENST00000589559 TNRC18O15417 2968 aaPredicted RBP23.19■■□□□ 1.3
RBM42-204ENST00000589559 FRMPD3Q5JV73 1810 aa23.19■■□□□ 1.3
RBM42-204ENST00000589559 EDNRBP24530 442 aa23.19■■□□□ 1.3
RBM42-204ENST00000589559 PDIA3P30101 505 aaKnown RBP23.19■■□□□ 1.3
RBM42-204ENST00000589559 TNFAIP2Q03169 654 aa23.19■■□□□ 1.3
RBM42-204ENST00000589559 UBE2Q1Q7Z7E8 422 aa23.19■■□□□ 1.3
RBM42-204ENST00000589559 RAB11FIP4Q86YS3 637 aa23.19■■□□□ 1.3
RBM42-204ENST00000589559 PAWRQ96IZ0 340 aaKnown RBP23.19■■□□□ 1.3
RBM42-204ENST00000589559 UPF3BQ9BZI7 483 aaKnown RBP23.19■■□□□ 1.3
RBM42-204ENST00000589559 PIK3CDO00329 1044 aa23.18■■□□□ 1.3
RBM42-204ENST00000589559 CPLX1O14810 134 aa23.18■■□□□ 1.3
RBM42-204ENST00000589559 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.3
RBM42-204ENST00000589559 TAL1P17542 331 aaPredicted RBP23.18■■□□□ 1.3
RBM42-204ENST00000589559 C8orf34Q49A92 452 aa23.18■■□□□ 1.3
RBM42-204ENST00000589559 PPP1R18Q6NYC8 613 aa23.18■■□□□ 1.3
RBM42-204ENST00000589559 CMTR1Q8N1G2 835 aaKnown RBP23.18■■□□□ 1.3
RBM42-204ENST00000589559 SMARCC2Q8TAQ2 1214 aa23.18■■□□□ 1.3
RBM42-204ENST00000589559 CCDC12Q8WUD4 166 aaPredicted RBP23.18■■□□□ 1.3
RBM42-204ENST00000589559 TSEN34Q9BSV6 310 aaKnown RBP23.18■■□□□ 1.3
RBM42-204ENST00000589559 PSTPIP2Q9H939 334 aa23.18■■□□□ 1.3
RBM42-204ENST00000589559 V9GY48 417 aaPredicted RBP23.18■■□□□ 1.3
RBM42-204ENST00000589559 EIF3JO75822 258 aaKnown RBP23.17■■□□□ 1.3
RBM42-204ENST00000589559 ADD1P35611 737 aaKnown RBP23.17■■□□□ 1.3
RBM42-204ENST00000589559 TOB2Q14106 344 aaPredicted RBP23.17■■□□□ 1.3
RBM42-204ENST00000589559 NOL8Q76FK4 1167 aaKnown RBP23.17■■□□□ 1.3
RBM42-204ENST00000589559 TRIM22Q8IYM9 498 aa23.17■■□□□ 1.3
RBM42-204ENST00000589559 PCSK9Q8NBP7 692 aaKnown RBP23.17■■□□□ 1.3
RBM42-204ENST00000589559 TBC1D5Q92609 795 aa23.17■■□□□ 1.3
RBM42-204ENST00000589559 TAAR1Q96RJ0 339 aa23.17■■□□□ 1.3
RBM42-204ENST00000589559 KATNBL1Q9H079 304 aa23.17■■□□□ 1.3
RBM42-204ENST00000589559 AP5M1Q9H0R1 490 aa23.17■■□□□ 1.3
RBM42-204ENST00000589559 STAM2O75886 525 aa23.16■■□□□ 1.3
RBM42-204ENST00000589559 CDC27P30260 824 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms