RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 USH1GQ495M9 461 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 C9orf50Q5SZB4 431 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 FAM122AQ96E09 287 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 ESYT1Q9BSJ8 1104 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 ATP11BQ9Y2G3 1177 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 MROH7Q68CQ1 1323 aa12.35□□□□□ -0.43
CLPTM1-211ENST00000589347 A0A1W2PQ45 241 aaPredicted RBP12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 A0A1W2PQY0 241 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 NFIBO00712 420 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 ZEB2O60315 1214 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 CALML3P27482 149 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 CST5P28325 142 aaPredicted RBP12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 ADCYAP1R1P41586 468 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 SNX17Q15036 470 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 SEC23AQ15436 765 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 SLC39A5Q6ZMH5 540 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 LENG1Q96BZ8 264 aaPredicted RBP12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 UBA5Q9GZZ9 404 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 STARD7Q9NQZ5 370 aa12.34□□□□□ -0.43
CLPTM1-211ENST00000589347 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 GJA9P57773 515 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 RPS6P62753 249 aaKnown RBP12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 TNFAIP2Q03169 654 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 PDE4DQ08499 809 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 C1orf53Q5VUE5 145 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 SLC30A10Q6XR72 485 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 TLK2Q86UE8 772 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 FBXO11Q86XK2 927 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 MCF2L2Q86YR7 1114 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 FBXO16Q8IX29 292 aaPredicted RBP12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 DNERQ8NFT8 737 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 MTA3Q9BTC8 594 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 KATNBL1Q9H079 304 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 UPF3AQ9H1J1 476 aaKnown RBP12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 PRDM5Q9NQX1 630 aaPredicted RBP12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 MRPL11Q9Y3B7 192 aaKnown RBP12.33□□□□□ -0.44
CLPTM1-211ENST00000589347 CDC45O75419 566 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 ACLYP53396 1101 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 GRM4Q14833 912 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 TRIM60Q495X7 471 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 KLHDC9Q8NEP7 349 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 MORC4Q8TE76 937 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 CLEC4DQ8WXI8 215 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 AMNQ9BXJ7 453 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 SCN10AQ9Y5Y9 1956 aa12.32□□□□□ -0.44
CLPTM1-211ENST00000589347 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 KLRF2D3W0D1 207 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 CABYRO75952 493 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 DDAH1O94760 285 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 KIF5BP33176 963 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 MCM5P33992 734 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 KCNA10Q16322 511 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 BRDTQ58F21 947 aaPredicted RBP12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 GNASQ5JWF2 1037 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 IQSEC1Q6DN90 963 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 NFXL1Q6ZNB6 911 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 EEPD1Q7L9B9 569 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 TMTC2Q8N394 836 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 TMEM87BQ96K49 555 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 VAT1LQ9HCJ6 419 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 Q9Y3F1 56 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 ELP1O95163 1332 aa12.31□□□□□ -0.44
CLPTM1-211ENST00000589347 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 CCDC69A6NI79 296 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 DCDC2CA8MYV0 355 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 SLC27A2O14975 620 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 ZBTB5O15062 677 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 PQBP1O60828 265 aaKnown RBP12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 ASGR1P07306 291 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 CLTBP09497 229 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 PPP2R5BQ15173 497 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 CREB3L3Q68CJ9 461 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 STOX1Q6ZVD7 989 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 VTI1AQ96AJ9 217 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 JMJD4Q9H9V9 463 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 PDLIM7Q9NR12 457 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms