RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 DEFB115Q30KQ5 88 aa28.27■■■□□ 2.12
RFX1-205ENST00000589239 RILPL1Q5EBL4 403 aa28.27■■■□□ 2.12
RFX1-205ENST00000589239 RABGAP1Q9Y3P9 1069 aa28.27■■■□□ 2.12
RFX1-205ENST00000589239 RASSF10A6NK89 507 aa28.26■■■□□ 2.11
RFX1-205ENST00000589239 GCOM1H8Y6P7 765 aaPredicted RBP28.26■■■□□ 2.11
RFX1-205ENST00000589239 POLR2MP0CAP2 368 aa28.26■■■□□ 2.11
RFX1-205ENST00000589239 PARK7Q99497 189 aaKnown RBP28.26■■■□□ 2.11
RFX1-205ENST00000589239 CLIC4Q9Y696 253 aa28.26■■■□□ 2.11
RFX1-205ENST00000589239 MYH15Q9Y2K3 1946 aa28.26■■■□□ 2.11
RFX1-205ENST00000589239 WNT7AO00755 349 aa28.25■■■□□ 2.11
RFX1-205ENST00000589239 NONOQ15233 471 aaKnown RBP eCLIP28.25■■■□□ 2.11
RFX1-205ENST00000589239 Q3C1V9 767 aa28.25■■■□□ 2.11
RFX1-205ENST00000589239 CFAP45Q9UL16 551 aa28.25■■■□□ 2.11
RFX1-205ENST00000589239 PCNTO95613 3336 aa28.25■■■□□ 2.11
RFX1-205ENST00000589239 INHBEP58166 350 aa28.25■■■□□ 2.11
RFX1-205ENST00000589239 MCF2L2Q86YR7 1114 aa28.25■■■□□ 2.11
RFX1-205ENST00000589239 TBCKQ8TEA7 893 aa28.25■■■□□ 2.11
RFX1-205ENST00000589239 FCHSD1Q86WN1 690 aa28.24■■■□□ 2.11
RFX1-205ENST00000589239 IFNL1Q8IU54 200 aa28.24■■■□□ 2.11
RFX1-205ENST00000589239 RIOX2Q8IUF8 465 aa28.24■■■□□ 2.11
RFX1-205ENST00000589239 MOV10L1Q9BXT6 1211 aaKnown RBP28.24■■■□□ 2.11
RFX1-205ENST00000589239 NOL7Q9UMY1 257 aaKnown RBP28.24■■■□□ 2.11
RFX1-205ENST00000589239 SREBF2Q12772 1141 aa28.24■■■□□ 2.11
RFX1-205ENST00000589239 ATL3Q6DD88 541 aa28.24■■■□□ 2.11
RFX1-205ENST00000589239 PCDHB6Q9Y5E3 794 aa28.24■■■□□ 2.11
RFX1-205ENST00000589239 SPDYE3A6NKU9 549 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 AP3B2Q13367 1082 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 SF3A1Q15459 793 aaKnown RBP28.23■■■□□ 2.11
RFX1-205ENST00000589239 TKFCQ3LXA3 575 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 ANO1Q5XXA6 986 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 NSMFQ6X4W1 530 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 ANKRD13CQ8N6S4 541 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 GTF3C2Q8WUA4 911 aaPredicted RBP28.23■■■□□ 2.11
RFX1-205ENST00000589239 CAPNS2Q96L46 248 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 ANO3Q9BYT9 981 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 ACAD9Q9H845 621 aa28.23■■■□□ 2.11
RFX1-205ENST00000589239 MCM4P33991 863 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 HSD17B4P51659 736 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 ERVK-9P63128 1117 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 ERVK-24P63145 666 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 POLR3EQ9NVU0 708 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 RTEL1Q9NZ71 1219 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 AOC2O75106 756 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 HTRA3P83110 453 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 NCAPG2Q86XI2 1143 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 R3HDMLQ9H3Y0 253 aa28.22■■■□□ 2.11
RFX1-205ENST00000589239 TRAPPC10P48553 1259 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 RPS6P62753 249 aaKnown RBP28.21■■■□□ 2.11
RFX1-205ENST00000589239 GHRHRQ02643 423 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 NOGQ13253 232 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 TTC38Q5R3I4 469 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 RNF207Q6ZRF8 634 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 SPATA32Q96LK8 384 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 SCAND2PQ9GZW5 306 aaPredicted RBP28.21■■■□□ 2.11
RFX1-205ENST00000589239 COL20A1Q9P218 1284 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 ERCC3P19447 782 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 GCLCP48506 637 aaPredicted RBP28.21■■■□□ 2.11
RFX1-205ENST00000589239 SLC30A10Q6XR72 485 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 TEX2Q8IWB9 1127 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 CHST13Q8NET6 341 aa28.21■■■□□ 2.11
RFX1-205ENST00000589239 ZCCHC17Q9NP64 241 aaKnown RBP28.21■■■□□ 2.11
RFX1-205ENST00000589239 FOSP01100 380 aaPredicted RBP28.2■■■□□ 2.1
RFX1-205ENST00000589239 TM4SF4P48230 202 aa28.2■■■□□ 2.1
RFX1-205ENST00000589239 NASPP49321 788 aaPredicted RBP28.2■■■□□ 2.1
RFX1-205ENST00000589239 TAF1CQ15572 869 aaPredicted RBP28.2■■■□□ 2.1
RFX1-205ENST00000589239 NEK8Q86SG6 692 aa28.2■■■□□ 2.1
RFX1-205ENST00000589239 GPRC5AQ8NFJ5 357 aa28.2■■■□□ 2.1
RFX1-205ENST00000589239 LEO1Q8WVC0 666 aaPredicted RBP28.2■■■□□ 2.1
RFX1-205ENST00000589239 FSD2A1L4K1 749 aa28.19■■■□□ 2.1
RFX1-205ENST00000589239 ZNF174Q15697 407 aa28.19■■■□□ 2.1
RFX1-205ENST00000589239 LETM2Q2VYF4 491 aa28.19■■■□□ 2.1
RFX1-205ENST00000589239 A1CFQ9NQ94 594 aaKnown RBP28.19■■■□□ 2.1
RFX1-205ENST00000589239 EDIL3O43854 480 aa28.19■■■□□ 2.1
RFX1-205ENST00000589239 BAATQ14032 418 aaPredicted RBP28.19■■■□□ 2.1
RFX1-205ENST00000589239 GLIPR1L2Q4G1C9 344 aa28.19■■■□□ 2.1
RFX1-205ENST00000589239 MCTP2Q6DN12 878 aa28.19■■■□□ 2.1
RFX1-205ENST00000589239 LINC00301Q8NCQ3 95 aa28.19■■■□□ 2.1
RFX1-205ENST00000589239 SYTL5Q8TDW5 730 aaPredicted RBP28.19■■■□□ 2.1
RFX1-205ENST00000589239 GOLGA6L22H0YM25 854 aa28.18■■■□□ 2.1
RFX1-205ENST00000589239 PRPF40AO75400 957 aaKnown RBP28.18■■■□□ 2.1
RFX1-205ENST00000589239 SLC25A27O95847 323 aa28.18■■■□□ 2.1
RFX1-205ENST00000589239 GOLGA6L3A6NEY3 463 aa28.18■■■□□ 2.1
RFX1-205ENST00000589239 STK38Q15208 465 aa28.18■■■□□ 2.1
RFX1-205ENST00000589239 PURBQ96QR8 312 aaKnown RBP28.18■■■□□ 2.1
RFX1-205ENST00000589239 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.18■■■□□ 2.1
RFX1-205ENST00000589239 MAP3K20Q9NYL2 800 aaKnown RBP28.18■■■□□ 2.1
RFX1-205ENST00000589239 RCOR1Q9UKL0 485 aa28.18■■■□□ 2.1
RFX1-205ENST00000589239 CCNT1O60563 726 aaKnown RBP28.17■■■□□ 2.1
RFX1-205ENST00000589239 MCM7P33993 719 aa28.17■■■□□ 2.1
RFX1-205ENST00000589239 PTPAQ15257 358 aa28.17■■■□□ 2.1
RFX1-205ENST00000589239 PORCNQ9H237 461 aa28.17■■■□□ 2.1
RFX1-205ENST00000589239 CYP39A1Q9NYL5 469 aa28.17■■■□□ 2.1
RFX1-205ENST00000589239 FBXO40Q9UH90 709 aa28.17■■■□□ 2.1
RFX1-205ENST00000589239 YEATS4O95619 227 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 SAMD3Q8N6K7 520 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 MORF4L1Q9UBU8 362 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 CPA4Q9UI42 421 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 XRCC6P12956 609 aaKnown RBP eCLIP28.16■■■□□ 2.1
RFX1-205ENST00000589239 CLCN1P35523 988 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 SREBF1P36956 1147 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms