RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CDKAL1Q5VV42 579 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 RNF19BQ6ZMZ0 732 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 KRT25Q7Z3Z0 450 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 HEATR3Q7Z4Q2 680 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 TC2NQ8N9U0 490 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 RRP36Q96EU6 259 aaKnown RBP8.33□□□□□ -1.08
ZNF540-206ENST00000589117 TUBB2BQ9BVA1 445 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 IL17RBQ9NRM6 502 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 ADD3Q9UEY8 706 aaKnown RBP8.33□□□□□ -1.08
ZNF540-206ENST00000589117 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 BAZ2AQ9UIF9 1905 aaKnown RBP8.33□□□□□ -1.08
ZNF540-206ENST00000589117 ITIH6Q6UXX5 1313 aa8.33□□□□□ -1.08
ZNF540-206ENST00000589117 A0A087X0B3 334 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 KLRF2D3W0D1 207 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 POTEB2H3BUK9 544 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 hCG_1984214I3L0E3 225 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 N4BP3O15049 544 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 RPN1P04843 607 aaKnown RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 PARP1P09874 1014 aaKnown RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 GNG11P61952 73 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 CBX1P83916 185 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 PTK7Q13308 1070 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 NFIXQ14938 502 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 CCDC93Q567U6 631 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 REXO1L1PQ8IX06 675 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 TEX11Q8IYF3 940 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 CCDC24Q8N4L8 307 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 ZNF713Q8N859 430 aaPredicted RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 SHISA4Q96DD7 197 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 SPZ1Q9BXG8 430 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 INTS13Q9NVM9 706 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 MAD2L2Q9UI95 211 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 JAG2Q9Y219 1238 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 SPATA31A6Q5VVP1 1343 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 MYH13Q9UKX3 1938 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 A0A1B0GUL6 1792 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 MAST2Q6P0Q8 1798 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 DLEC1Q9Y238 1755 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 GPR75-ASB3A0A0A6YYF3 556 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 EFCAB8A8MWE9 144 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 KIF5CO60282 957 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 UFL1O94874 794 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 IL1R1P14778 569 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 STX17P56962 302 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 TAGLNQ01995 201 aaKnown RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 KCNB1Q14721 858 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 PDXDC2PQ6P474 469 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 TMTC1Q8IUR5 882 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 NOC3LQ8WTT2 800 aaKnown RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 FAM163AQ96GL9 167 aaPredicted RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 EYA3Q99504 573 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 TMEM47Q9BQJ4 181 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 CCSER1Q9C0I3 900 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 CD209Q9NNX6 404 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 DISC1Q9NRI5 854 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 MAGEC2Q9UBF1 373 aaPredicted RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 LIMA1Q9UHB6 759 aaKnown RBP8.32□□□□□ -1.08
ZNF540-206ENST00000589117 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
ZNF540-206ENST00000589117 SOWAHDA6NJG2 315 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 ZBBXA8MT70 800 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 PSMA7O14818 248 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 RIMBP2O15034 1052 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 BTDP43251 543 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 NAPAP54920 295 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 NONOQ15233 471 aaKnown RBP eCLIP8.31□□□□□ -1.08
ZNF540-206ENST00000589117 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 C16orf86Q6ZW13 317 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 RETREG3Q86VR2 466 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 TMEM139Q8IV31 216 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 MAPKAPK5Q8IW41 473 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 NEDD1Q8NHV4 660 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 DYNLL2Q96FJ2 89 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 ZMYND12Q9H0C1 365 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 TMX4Q9H1E5 349 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-206ENST00000589117 DDX41Q9UJV9 622 aaKnown RBP8.31□□□□□ -1.08
ZNF540-206ENST00000589117 CTNND2Q9UQB3 1225 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 COL24A1Q17RW2 1714 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 HOXA7P31268 230 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-206ENST00000589117 CDK8P49336 464 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 RBL2Q08999 1139 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 BMS1Q14692 1282 aaKnown RBP8.31□□□□□ -1.08
ZNF540-206ENST00000589117 ELF2Q15723 593 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 SLC4A8Q2Y0W8 1093 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 TCP11X2Q5H9J9 407 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 TRIM65Q6PJ69 517 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 BLOC1S3Q6QNY0 202 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 SMIM5Q71RC9 77 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 NELFBQ8WX92 580 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 GPKOWQ92917 476 aaPredicted RBP eCLIP8.31□□□□□ -1.08
ZNF540-206ENST00000589117 RAB34Q9BZG1 259 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 BLZF1Q9H2G9 400 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 PCDHA6Q9UN73 950 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 TTF2Q9UNY4 1162 aaKnown RBP8.31□□□□□ -1.08
ZNF540-206ENST00000589117 SUGT1Q9Y2Z0 365 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 PCDHA8Q9Y5H6 950 aa8.31□□□□□ -1.08
ZNF540-206ENST00000589117 COL4A1P02462 1669 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms